RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 NECAP1Q8NC96 275 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 CCDC140Q96MF4 163 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 IGLC7A0M8Q6 106 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 CRYGCP07315 174 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 NHLRC4P0CG21 123 aaPredicted RBP13.47□□□□□ -0.25
PNKP-230ENST00000638016 CTRB1P17538 263 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 MAS1LP35410 378 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 TAS2R31P59538 309 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 TAS2R46P59540 309 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 POU2AF1Q16633 256 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 PHLDA2Q53GA4 152 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 CTRB2Q6GPI1 263 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 SLC25A42Q86VD7 318 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 DMBX1Q8NFW5 382 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 OR10W1Q8NGF6 305 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 FCAMRQ8WWV6 532 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 WWC2-AS2Q96NR7 200 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 TENM3Q9P273 2699 aa13.47□□□□□ -0.25
PNKP-230ENST00000638016 MFSD2BA6NFX1 497 aa13.46□□□□□ -0.25
PNKP-230ENST00000638016 NQO2P16083 231 aa13.46□□□□□ -0.25
PNKP-230ENST00000638016 RORCP51449 518 aa13.46□□□□□ -0.25
PNKP-230ENST00000638016 ZNF585BQ52M93 769 aa13.46□□□□□ -0.25
PNKP-230ENST00000638016 OR4A5Q8NH83 315 aa13.46□□□□□ -0.25
PNKP-230ENST00000638016 PLEKHA2Q9HB19 425 aa13.46□□□□□ -0.25
PNKP-230ENST00000638016 ZC4H2Q9NQZ6 224 aa13.46□□□□□ -0.25
PNKP-230ENST00000638016 NSG2Q9Y328 171 aa13.46□□□□□ -0.25
PNKP-230ENST00000638016 FAM25AB3EWG3 89 aa13.45□□□□□ -0.26
PNKP-230ENST00000638016 FAM25CB3EWG5 89 aa13.45□□□□□ -0.26
PNKP-230ENST00000638016 FAM25GB3EWG6 89 aa13.45□□□□□ -0.26
PNKP-230ENST00000638016 M0QYG6 137 aa13.45□□□□□ -0.26
PNKP-230ENST00000638016 OR2C1O95371 312 aa13.45□□□□□ -0.26
PNKP-230ENST00000638016 IGHV4-30-4P0DP06 118 aa13.45□□□□□ -0.26
PNKP-230ENST00000638016 LPAR6P43657 344 aa13.45□□□□□ -0.26
PNKP-230ENST00000638016 CLEC19AQ6UXS0 136 aa13.45□□□□□ -0.26
PNKP-230ENST00000638016 OR6F1Q8NGZ6 308 aa13.45□□□□□ -0.26
PNKP-230ENST00000638016 IGLV11-55A0A075B6I3 123 aa13.44□□□□□ -0.26
PNKP-230ENST00000638016 SMIM31A0A1B0GVY4 71 aa13.44□□□□□ -0.26
PNKP-230ENST00000638016 MARCH11A6NNE9 402 aa13.44□□□□□ -0.26
PNKP-230ENST00000638016 GPR31O00270 319 aa13.44□□□□□ -0.26
PNKP-230ENST00000638016 F2RP25116 425 aa13.44□□□□□ -0.26
PNKP-230ENST00000638016 G6PCP35575 357 aa13.44□□□□□ -0.26
PNKP-230ENST00000638016 CACNG8Q8WXS5 425 aa13.44□□□□□ -0.26
PNKP-230ENST00000638016 DGCR14Q96DF8 476 aaKnown RBP13.44□□□□□ -0.26
PNKP-230ENST00000638016 THAP7Q9BT49 309 aaPredicted RBP13.44□□□□□ -0.26
PNKP-230ENST00000638016 COMMD9Q9P000 198 aa13.44□□□□□ -0.26
PNKP-230ENST00000638016 RYR3Q15413 4870 aa13.44□□□□□ -0.26
PNKP-230ENST00000638016 DBX1A6NMT0 343 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 KRASP01116 189 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 RCVRNP35243 200 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 TSPAN5P62079 268 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 TATDN3Q17R31 274 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 CMTM3Q96MX0 182 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 COMMD5Q9GZQ3 224 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 SCPEP1Q9HB40 452 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 EXTL2Q9UBQ6 330 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 KLK11Q9UBX7 282 aa13.43□□□□□ -0.26
PNKP-230ENST00000638016 TEX50A0A1B0GTY4 177 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 DEFA4P12838 97 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 ARL3P36405 182 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 ALDH3B2P48448 385 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 MECP2P51608 486 aaKnown RBP13.42□□□□□ -0.26
PNKP-230ENST00000638016 ERVK-16P61578 105 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 WT1-ASQ06250 92 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 SPCS2Q15005 226 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 CD300EQ496F6 205 aaPredicted RBP13.42□□□□□ -0.26
PNKP-230ENST00000638016 OR52I2Q8NH67 350 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 CD300LFQ8TDQ1 290 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 RCHY1Q96PM5 261 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 QTRT1Q9BXR0 403 aaKnown RBP13.42□□□□□ -0.26
PNKP-230ENST00000638016 MRPS26Q9BYN8 205 aaKnown RBP13.42□□□□□ -0.26
PNKP-230ENST00000638016 MIXL1Q9H2W2 232 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 SIGLEC8Q9NYZ4 499 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 PEMTQ9UBM1 199 aa13.42□□□□□ -0.26
PNKP-230ENST00000638016 NBEAL2Q6ZNJ1 2754 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 C2orf70A6NJV1 201 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 GGCTO75223 188 aaKnown RBP13.41□□□□□ -0.26
PNKP-230ENST00000638016 ZNF182P17025 639 aaPredicted RBP13.41□□□□□ -0.26
PNKP-230ENST00000638016 MFAP2P55001 183 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 KLK9Q2XQG4 91 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 TBC1D26Q86UD7 250 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 CMTM1Q8IZ96 169 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 BORCS5Q969J3 196 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 EEF1AKMT3Q96AZ1 226 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 ABHD1Q96SE0 405 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 AIFM2Q9BRQ8 373 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 HINT2Q9BX68 163 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 C19orf73Q9NVV2 129 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 KLK9Q9UKQ9 250 aa13.41□□□□□ -0.26
PNKP-230ENST00000638016 IGHV3-21A0A0B4J1V1 117 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 IGHV3-35A0A0C4DH35 117 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 H0Y980 276 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 IGKV1-39P01597 117 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 IGKV1D-39P04432 117 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 OR13C7P0DN81 318 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 PI3P19957 117 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 GPR183P32249 361 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 LCN12Q6JVE5 192 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 MZT2AQ6P582 158 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 GPR141Q7Z602 305 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 OR4D10Q8NGI6 311 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms