RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 STPG2Q8N412 459 aa12.34□□□□□ -0.43
CLN6-219ENST00000637329 TMEM252Q8N6L7 170 aa12.34□□□□□ -0.43
CLN6-219ENST00000637329 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
CLN6-219ENST00000637329 TCF19Q9Y242 345 aa12.34□□□□□ -0.43
CLN6-219ENST00000637329 TRAV3A0A0B4J244 114 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 IGSF23A1L1A6 192 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 KCNAB3O43448 404 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 MOSP00540 346 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 IGHV4-31P0DP07 118 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 IAPPP10997 89 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 MAS1LP35410 378 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 SULT1A1P50225 295 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 RPP30P78346 268 aaKnown RBP12.33□□□□□ -0.44
CLN6-219ENST00000637329 PRCDQ00LT1 54 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 EBI3Q14213 229 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 SSX2Q16385 188 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 TMEM249Q2WGJ8 235 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 TEX261Q6UWH6 196 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 OR2T10Q8NGZ9 312 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 PHYHIPLQ96FC7 376 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 ZNF471Q9BX82 626 aaPredicted RBP12.33□□□□□ -0.44
CLN6-219ENST00000637329 C7orf69Q9H7B7 122 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 FBXL17Q9UF56 701 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 OR51B2Q9Y5P1 312 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 U3KQ87 197 aa12.33□□□□□ -0.44
CLN6-219ENST00000637329 A0A1W2PRD5 423 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 A0A1W2PRF3 423 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 A0A1W2PRM7 423 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 INS-IGF2F8WCM5 200 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 SLC25A17O43808 307 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 NDUFA3O95167 84 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 IFNA7P01567 189 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
CLN6-219ENST00000637329 BRS3P32247 399 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 HOXA1P49639 335 aaPredicted RBP12.32□□□□□ -0.44
CLN6-219ENST00000637329 BPIFB3P59826 476 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 PSG5Q15238 335 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 THNSL2Q86YJ6 484 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 MMD2Q8IY49 270 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 OR8H1Q8NGG4 311 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 AJUBAQ96IF1 538 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 COMMD5Q9GZQ3 224 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 HIPK2Q9H2X6 1198 aa12.32□□□□□ -0.44
CLN6-219ENST00000637329 STRAPQ9Y3F4 350 aaKnown RBP12.32□□□□□ -0.44
CLN6-219ENST00000637329 FAM24AA6NFZ4 105 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 JTBO76095 146 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 IGKV1D-33P01593 117 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 IGKV1-33P01594 117 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 CRYGBP07316 175 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 VDAC2P45880 294 aaPredicted RBP12.31□□□□□ -0.44
CLN6-219ENST00000637329 DYNLT3P51808 116 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 HBG1P69891 147 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 HBG2P69892 147 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 ZNF266Q14584 549 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 MRPL41Q8IXM3 137 aaKnown RBP12.31□□□□□ -0.44
CLN6-219ENST00000637329 DYNAPQ8N1N2 210 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 Q8N6K4 173 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 NPBQ8NG41 125 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 OR1L8Q8NGR8 309 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 ST8SIA2Q92186 375 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 PLEKHA3Q9HB20 300 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 ENY2Q9NPA8 101 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 ARHGAP32A7KAX9 2087 aa12.31□□□□□ -0.44
CLN6-219ENST00000637329 BORCS7-ASMTA0A0B4J1R7 106 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 A0A1W2PN81 502 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 H3BP45 60 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 RRHO14718 337 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 NBR2O15453 112 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 SNRNP70P08621 437 aaKnown RBP12.3□□□□□ -0.44
CLN6-219ENST00000637329 CHRNA7P36544 502 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 ATP5IP56385 69 aaPredicted RBP12.3□□□□□ -0.44
CLN6-219ENST00000637329 MMDQ15546 238 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 PRSS8Q16651 343 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 UBAC2Q8NBM4 344 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 OR1S2Q8NGQ3 325 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 EAF1Q96JC9 268 aaPredicted RBP12.3□□□□□ -0.44
CLN6-219ENST00000637329 ZNF430Q9H8G1 570 aaPredicted RBP12.3□□□□□ -0.44
CLN6-219ENST00000637329 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 METTL1Q9UBP6 276 aaKnown RBP12.3□□□□□ -0.44
CLN6-219ENST00000637329 SIGLEC9Q9Y336 463 aa12.3□□□□□ -0.44
CLN6-219ENST00000637329 MAP1AP78559 2803 aaPredicted RBP12.3□□□□□ -0.44
CLN6-219ENST00000637329 TEX50A0A1B0GTY4 177 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 DFFBO76075 338 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 TGFAP01135 160 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 FAM106CPP0CH98 169 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 FOSL1P15407 271 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 NHLH2Q02577 135 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 TMEM267Q0VDI3 215 aaPredicted RBP12.29□□□□□ -0.44
CLN6-219ENST00000637329 EXOSC2Q13868 293 aaKnown RBP12.29□□□□□ -0.44
CLN6-219ENST00000637329 SPANXN5Q5MJ07 72 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 PPP1R27Q86WC6 154 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 ZNF680Q8NEM1 530 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 C17orf50Q8WW18 174 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 RITA1Q96K30 269 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 OR4C12Q96R67 309 aa12.29□□□□□ -0.44
CLN6-219ENST00000637329 ATP5SQ99766 215 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms