RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 GATD1Q8NB37 220 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 OR10S1Q8NGN2 331 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 TNFSF10P50591 281 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 CLDND2Q8NHS1 167 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 ARHGEF17Q96PE2 2063 aaPredicted RBP15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 PKD1L3Q7Z443 1732 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 C5orf67F2Z3F1 127 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 ZNF625Q96I27 306 aaPredicted RBP15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 PRELID3AQ96N28 172 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 TRAV2A0A0B4J234 112 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 PSMG4Q5JS54 123 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 Q5PR19 223 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 MRPL20Q9BYC9 149 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 OGG1O15527 345 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 SLIRPQ9GZT3 109 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 KIAA1217Q5T5P2 1943 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 COPS9Q8WXC6 57 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 RAB24Q969Q5 203 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 PLXNB2O15031 1838 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 SEC11BP0C7V7 166 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 ZNF79Q15937 498 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 C1QTNF12Q5T7M4 302 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 SLC17A3O00476 420 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 HLA-DRB1P01911 266 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 NAT1P18440 290 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 C10orf35Q96D05 121 aa15.12■□□□□ 0.01
CACNA1A-227ENST00000636549 TDRD15B5MCY1 1934 aaKnown RBP15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 IGFBP2P18065 325 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 IL17RELQ6ZVW7 336 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 NABP2Q9BQ15 211 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 PMCHL2Q9BQD1 86 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 CGAP01215 116 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 CYP2G1PQ6ZSU1 146 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 ELOVL5Q9NYP7 299 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 CKAP5Q14008 2032 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 RAMP1O60894 148 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 DNM1P46Q6ZS02 220 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 PRSS22Q9GZN4 317 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 IFT22Q9H7X7 185 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 PMCHL1Q16048 86 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 HOGA1Q86XE5 327 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 ALS2Q96Q42 1657 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 KLF4O43474 513 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 TFF3Q07654 80 aa15.11■□□□□ 0.01
CACNA1A-227ENST00000636549 ATP5LO75964 103 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 CD160O95971 181 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 C1QTNF9BB2RNN3 333 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 FAM27BQ5VT28 67 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 PDCD11Q14690 1871 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 H0Y980 276 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 SLC25A28Q96A46 364 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 ASCL2Q99929 193 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 KNL1Q8NG31 2342 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 H3BRM9 83 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 CECR9P0C854 216 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 C8orf88P0DMB2 117 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 HOXA5P20719 270 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 CKS1BP61024 79 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 NDPQ00604 133 aa15.1■□□□□ 0.01
CACNA1A-227ENST00000636549 PRB1P04280 392 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 LEPP41159 167 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 IMMP2LQ96T52 175 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 APOHP02749 345 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 BCL2P10415 239 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 CENPWQ5EE01 88 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 LSM4Q9Y4Z0 139 aaKnown RBP15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 NDUFA2O43678 99 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 TCF24Q7RTU0 167 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 TMEM105Q8N8V8 129 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 OR10AG1Q8NH19 301 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 TRAF4Q9BUZ4 470 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 TNFRSF9Q07011 255 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 PAX2Q02962 417 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 C14orf144Q96I85 54 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 LOXL4Q96JB6 756 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 NUP214P35658 2090 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 ASAH2BP0C7U1 165 aa15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 TAF15Q92804 592 aaKnown RBP eCLIP15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 SIRT4Q9Y6E7 314 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-227ENST00000636549 FAM74A3Q4VXF1 159 aa15.08■□□□□ 0.01
CACNA1A-227ENST00000636549 ACTL10Q5JWF8 245 aa15.08■□□□□ 0.01
CACNA1A-227ENST00000636549 ZNF329Q86UD4 541 aa15.08■□□□□ 0.01
CACNA1A-227ENST00000636549 PTP4A3O75365 173 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 TMEM186Q96B77 213 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 KCNE5Q9UJ90 142 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 HSPE1P61604 102 aaKnown RBP15.08■□□□□ 0
CACNA1A-227ENST00000636549 A0A0G2JLM5 398 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 UBE2V2Q15819 145 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 CSRP2Q16527 193 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 OR11H4Q8NGC9 324 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 TCF19Q9Y242 345 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 MTCL1Q9Y4B5 1905 aaKnown RBP15.08■□□□□ 0
CACNA1A-227ENST00000636549 SMIM13P0DJ93 91 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 C1orf122Q6ZSJ8 110 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 RPRMQ9NS64 109 aa15.08■□□□□ 0
CACNA1A-227ENST00000636549 ADAMTSL3P82987 1691 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 GALP22466 123 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 FHITP49789 147 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 LCNL1Q6ZST4 164 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 TMEM45BQ96B21 275 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms