RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FBXW9Q5XUX1 488 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 SFTA2Q6UW10 78 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 NKAPP1Q8N9T2 125 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 ZNF114Q8NC26 417 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 SRSF12Q8WXF0 261 aaKnown RBP5.21□□□□□ -1.58
SCN1A-212ENST00000636194 TMEM54Q969K7 222 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 SOSTQ9BQB4 213 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 ELOVL5Q9NYP7 299 aa5.21□□□□□ -1.58
SCN1A-212ENST00000636194 CDIPTO14735 213 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 DUSP14O95147 198 aaKnown RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 TSPAN7P41732 249 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 GLIPR1P48060 266 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 LIMS2Q7Z4I7 341 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 PGLYRP3Q96LB9 341 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 CHCHD5Q9BSY4 110 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 FBXL15Q9H469 300 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 ZNF275Q9NSD4 429 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 NHP2Q9NX24 153 aaKnown RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 CISD1Q9NZ45 108 aaKnown RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 GPR132Q9UNW8 380 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 QSER1Q2KHR3 1735 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 ZAR1LA6NP61 321 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 AHRRA9YTQ3 701 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 NPIPB8E9PQR5 432 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 NPIPB9F8W1W9 429 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 H3BQ15 152 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 MLNRO43193 412 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 NPIPB7O75200 414 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 APOHP02749 345 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 POLR2IP36954 125 aaKnown RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 LCN2P80188 198 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 OTPQ5XKR4 325 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 FAAP20Q6NZ36 180 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 LINC01553A4QN01 128 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 CTAG2O75638 210 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 CEACAM5P06731 702 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 SH2D5Q6ZV89 423 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 SBF2Q86WG5 1849 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 PCNX3Q9H6A9 2034 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 ORMDL2Q53FV1 153 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 OR51M1Q9H341 326 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 PLSCR4Q9NRQ2 329 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 CACNA1AO00555 2505 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 A8MWV9 139 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 PROB1E7EW31 1015 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 MGST3O14880 152 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 CYB5R3P00387 301 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 IGHG3P01860 377 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 VSIG10L2P0DP72 767 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 RNASE4P34096 147 aaKnown RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 ORMDL3Q8N138 153 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 TMEM99Q8N816 258 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 MTFP1Q9UDX5 166 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 DLEC1Q9Y238 1755 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 KCNE1BA0A087WTH5 132 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 IGKV6D-41A0A0C4DH26 115 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 TCRBV4S1A1TA0A5B7 111 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 FOXI3A8MTJ6 420 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 CEACAM1P13688 526 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 ISXQ2M1V0 245 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 ABHD12Q8N2K0 398 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 GTF3AQ92664 365 aaKnown RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 HIST1H2BAQ96A08 127 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 DSCR8Q96T75 97 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 OBSL1O75147 1896 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 CD33P20138 364 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 SELENOPP49908 381 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 POLR2GP62487 172 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 LINC00303Q3SY05 128 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 NKAIN4Q8IVV8 208 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 SLC50A1Q9BRV3 221 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 MRPL18Q9H0U6 180 aaKnown RBP5.2□□□□□ -1.58
SCN1A-212ENST00000636194 NRAPQ86VF7 1730 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 ZFYVE26Q68DK2 2539 aa5.2□□□□□ -1.58
SCN1A-212ENST00000636194 ATG2AQ2TAZ0 1938 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-212ENST00000636194 B9A039 149 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 PRB4P10163 310 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-212ENST00000636194 REG1BP48304 166 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 RND2P52198 227 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 OCIAD2Q56VL3 154 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 GLIS1Q8NBF1 620 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 A0A1B0GUT8 65 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 TEX22C9J3V5 150 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 H0Y980 276 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 J3QT63 122 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 SSTR5P35346 364 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 MESP2Q0VG99 397 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 CEACAM21Q3KPI0 293 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 FAM216AQ8WUB2 273 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 E9PQ18 207 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 LDLRAD4O15165 306 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 EMDP50402 254 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 SSBP2P81877 361 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-212ENST00000636194 FABP5Q01469 135 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 LY6EQ16553 131 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 NCMAPQ5T1S8 102 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 ST20Q9HBF5 79 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 PLAC1Q9HBJ0 212 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 LHX9Q9NQ69 397 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms