RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 RNF167Q9H6Y7 350 aa5.55□□□□□ -1.52
CACNA1A-222ENST00000636022 EDA2RQ9HAV5 297 aa5.55□□□□□ -1.52
CACNA1A-222ENST00000636022 KLK9Q9UKQ9 250 aa5.55□□□□□ -1.52
CACNA1A-222ENST00000636022 SSR3Q9UNL2 185 aa5.55□□□□□ -1.52
CACNA1A-222ENST00000636022 PRELID3BQ9Y3B1 194 aa5.55□□□□□ -1.52
CACNA1A-222ENST00000636022 FRAS1Q86XX4 4008 aa5.55□□□□□ -1.52
CACNA1A-222ENST00000636022 HMX3A6NHT5 357 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 AIREO43918 545 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 CREBL2O60519 120 aaPredicted RBP5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 KBTBD11O94819 623 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 CRYGCP07315 174 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 ZNF735P0CB33 412 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 PTHLHP12272 177 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 AP2S1P53680 142 aaPredicted RBP5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 SCAND1P57086 179 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 SSTP61278 116 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 CD300CQ08708 224 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 EXOSC2Q13868 293 aaKnown RBP5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 MSMO1Q15800 293 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 HAGHQ16775 308 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 TATDN3Q17R31 274 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 C15orf32Q32M92 178 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 LINC00322Q6ZN03 302 aaPredicted RBP5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 GPR141Q7Z602 305 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 SLC25A42Q86VD7 318 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 HOGA1Q86XE5 327 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 LINC00518Q8N0U6 118 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 Q8N402 240 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 MFSD4AQ8N468 514 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 OR4S2Q8NH73 311 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 TCTEX1D2Q8WW35 142 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 FANCD2OSQ96PS1 177 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 GPHA2Q96T91 129 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 DCUN1D5Q9BTE7 237 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 SLC2A9Q9NRM0 540 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 SPATA2Q9UM82 520 aa5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 MRPS7Q9Y2R9 242 aaKnown RBP5.54□□□□□ -1.52
CACNA1A-222ENST00000636022 TRAV18A0A075B6X5 111 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 A0A0A6YYH2 397 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 A6NJ64 397 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 CGB1A6NKQ9 187 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 ZNF785A8K8V0 405 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 NPIPB5A8MRT5 1133 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 PPP5D1E7EU14 171 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 OR2J3O76001 311 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 ACTL6BO94805 426 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 NDUFB8O95169 186 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 LYL1P12980 280 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 AREGP15514 252 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 EDN2P20800 178 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 FCGR2CP31995 323 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 MAS1LP35410 378 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 RPL27AP46776 148 aaKnown RBP5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 MXD1Q05195 221 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 DEFB114Q30KQ6 69 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 CD300EQ496F6 205 aaPredicted RBP5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 LCN12Q6JVE5 192 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 ZNF66Q6ZN08 573 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 GVQW1Q8N7I0 195 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 BEST4Q8NFU0 473 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 OR2K2Q8NGT1 345 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 VSTM2AQ8TAG5 236 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 Q9H521 79 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 AUNIPQ9H7T9 357 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 CCL28Q9NRJ3 127 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 TAS2R8Q9NYW2 309 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 PEMTQ9UBM1 199 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 RSL24D1Q9UHA3 163 aaKnown RBP5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 ZNF257Q9Y2Q1 563 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 ETV7Q9Y603 341 aa5.53□□□□□ -1.52
CACNA1A-222ENST00000636022 DNAH10Q8IVF4 4471 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 LOC100506127A0A0U1RQW1 187 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 C2orf70A6NJV1 201 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 LGALS9O00182 355 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 RBFOX2O43251 390 aaKnown RBP eCLIP5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 TNFSF12O43508 249 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 HRASP01112 189 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 PPYP01298 95 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 HLA-AP01891 365 aaKnown RBP5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 FOLR2P14207 255 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 MYOD1P15172 320 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 HLA-GP17693 338 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 PSMB6P28072 239 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 KIR2DS2P43631 304 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 RPL8P62917 257 aaKnown RBP5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 FAM209BQ5JX69 171 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 IDNKQ5T6J7 187 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 OR4A47Q6IF82 309 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 GTSCR1Q86UQ5 136 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 GPHB5Q86YW7 130 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 CCDC28AQ8IWP9 274 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 LAX1Q8IWV1 398 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 SPAG16Q8N0X2 631 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 ZBTB34Q8NCN2 500 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 OR13F1Q8NGS4 319 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 OR4A5Q8NH83 315 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 ENKURQ8TC29 256 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 SECTM1Q8WVN6 248 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 CCDC140Q96MF4 163 aa5.52□□□□□ -1.53
CACNA1A-222ENST00000636022 FYTTD1Q96QD9 318 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms