RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 WDR87Q6ZQQ6 2873 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 TRAV5A0A0B4J249 113 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 IGHV4-61A0A0C4DH41 118 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 EPOPA6NHQ4 379 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 LY6LH3BQJ8 138 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 BCL2L11O43521 198 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 TBL1XO60907 577 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 IGHV4-59P01825 116 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 APODP05090 189 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 CRYBA1P05813 215 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 ADRA2AP08913 450 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 UCHL1P09936 223 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 ATP6V0CP27449 155 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 CCR2P41597 374 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 MEF2BQ02080 365 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-213ENST00000630925 DHRS2Q13268 280 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 ODF3L2Q3SX64 289 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 FAM153CQ494X1 144 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF571Q7Z3V5 609 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-213ENST00000630925 MMGT1Q8N4V1 131 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 ZIC4Q8N9L1 334 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 C19orf24Q9BVV8 132 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 SELENOIQ9C0D9 397 aa3.79□□□□□ -1.8
SDCBP-213ENST00000630925 SCN10AQ9Y5Y9 1956 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 ECM29Q5VYK3 1845 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF462Q96JM2 2506 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 TMEM212A6NML5 194 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 CLDN25C9JDP6 229 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 H0YJW9 148 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 J3QQQ9 107 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 SS18L1O75177 396 aaPredicted RBP3.78□□□□□ -1.8
SDCBP-213ENST00000630925 SRSF10O75494 262 aaKnown RBP3.78□□□□□ -1.8
SDCBP-213ENST00000630925 TNFSF13O75888 250 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 MAS1P04201 325 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 GPX1P07203 203 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 IGLC6P0CF74 106 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 LAMP1P11279 417 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 ERGP11308 486 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 GATA2P23769 480 aaPredicted RBP3.78□□□□□ -1.8
SDCBP-213ENST00000630925 PPP1CCP36873 323 aaKnown RBP3.78□□□□□ -1.8
SDCBP-213ENST00000630925 SELENOPP49908 381 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 NDUFA6P56556 154 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 RPS13P62277 151 aaKnown RBP3.78□□□□□ -1.8
SDCBP-213ENST00000630925 HSD52Q0P140 79 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 FABP9Q0Z7S8 132 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 ZFP69Q49AA0 526 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 RPL22L1Q6P5R6 122 aaKnown RBP3.78□□□□□ -1.8
SDCBP-213ENST00000630925 UNQ9165/PRO28630Q6UXU0 137 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF441Q8N8Z8 693 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 OR4K5Q8NGD3 323 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 RXFP4Q8TDU9 374 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 LMX1AQ8TE12 382 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 LCN9Q8WX39 176 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 NAA38Q9BRA0 125 aaKnown RBP3.78□□□□□ -1.8
SDCBP-213ENST00000630925 EDA2RQ9HAV5 297 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 RPUSD1Q9UJJ7 312 aaKnown RBP3.78□□□□□ -1.8
SDCBP-213ENST00000630925 CYSLTR1Q9Y271 337 aa3.78□□□□□ -1.8
SDCBP-213ENST00000630925 USP9XQ93008 2570 aaPredicted RBP3.78□□□□□ -1.81
SDCBP-213ENST00000630925 ANKRD17O75179 2603 aaKnown RBP3.78□□□□□ -1.81
SDCBP-213ENST00000630925 TMEM72A0PK05 275 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 PGPA6NDG6 321 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 OR4C45A6NMZ5 311 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ISLRO14498 428 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 IGHV4-39P01824 125 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 HLA-EP13747 358 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ZNF141Q15928 474 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 BCL2L15Q5TBC7 163 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ZNF493Q6ZR52 646 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ATP5L2Q7Z4Y8 100 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 SLC35E3Q7Z769 313 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 CDC20BQ86Y33 519 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ZNF695Q8IW36 515 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 C9orf40Q8IXQ3 194 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 OR5AP2Q8NGF4 316 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 SOSTQ9BQB4 213 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ZNF471Q9BX82 626 aaPredicted RBP3.77□□□□□ -1.81
SDCBP-213ENST00000630925 Q9H521 79 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 TMEM216Q9P0N5 145 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ANAPC10Q9UM13 185 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 DOCK6Q96HP0 2047 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 SMG1Q96Q15 3661 aaKnown RBP3.77□□□□□ -1.81
SDCBP-213ENST00000630925 FRYQ5TBA9 3013 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 FER1L5A0AVI2 2057 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 IGHV3OR16-12A0A075B7B8 117 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 TRAV8-3A0A0A6YYJ7 113 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 A0A0J9YXV3 536 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 NPFFO15130 113 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 TSHBP01222 138 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 TRBV12-3P01733 135 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 PAEPP09466 180 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ZNF728P0DKX0 622 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 P0DMU3 169 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 FAM231AP0DMU4 169 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 FAM231CP0DMU5 169 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 BCL2P10415 239 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 FKBP2P26885 142 aaKnown RBP3.77□□□□□ -1.81
SDCBP-213ENST00000630925 GFERP55789 205 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ERCC8Q13216 396 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 HERPUD1Q15011 391 aa3.77□□□□□ -1.81
SDCBP-213ENST00000630925 ACP7Q6ZNF0 438 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms