RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 CGB1A6NKQ9 187 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 ATP6V1G2O95670 118 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 PPYP01298 95 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 CD7P09564 240 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 AREGP15514 252 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 ARL3P36405 182 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 CBX5P45973 191 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 TAS2R31P59538 309 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 MXD1Q05195 221 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 FAM106AQ4KMX7 169 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 OR4A47Q6IF82 309 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 SSX9Q7RTT3 188 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 SPAG16Q8N0X2 631 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 GIMAP1Q8WWP7 306 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 SRSF8Q9BRL6 282 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 AUNIPQ9H7T9 357 aa9.38□□□□□ -0.91
SOX2-OT-247ENST00000628347 TRBV7-1A0A0A6YYK4 115 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 TMEM213A2RRL7 107 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 RBMY1BA6NDE4 496 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 RBMY1EA6NEQ0 496 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 OR11H12B2RN74 326 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 TNFSF12O43508 249 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 HPRT1P00492 218 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 RBMY1DP0C7P1 496 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 NQO2P16083 231 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 EDN2P20800 178 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 CBLN1P23435 193 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 OR2B8PP59922 312 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 CATR1Q13166 79 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 IDNKQ5T6J7 187 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 CLEC19AQ6UXS0 136 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 OR5AP2Q8NGF4 316 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 IL17DQ8TAD2 202 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 CXorf58Q96LI9 332 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 GPHA2Q96T91 129 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 SLC5A7Q9GZV3 580 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 RNF167Q9H6Y7 350 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 SRD5A3Q9H8P0 318 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 RETNQ9HD89 108 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 DIABLOQ9NR28 239 aa9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 GAR1Q9NY12 217 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-247ENST00000628347 IGLC7A0M8Q6 106 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 UPK2O00526 184 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 IGHV3-23P01764 117 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 PTHLHP12272 177 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 MYOD1P15172 320 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 GUCA2BQ16661 112 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 ZNF57Q68EA5 555 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 THOC7Q6I9Y2 204 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 CADM3Q8N126 398 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 CD300LFQ8TDQ1 290 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 BORCS5Q969J3 196 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 MARC2Q969Z3 335 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 WDR89Q96FK6 387 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 WFDC10AQ9H1F0 79 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 PLEKHA2Q9HB19 425 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 COMMD9Q9P000 198 aa9.36□□□□□ -0.91
SOX2-OT-247ENST00000628347 TRAV25A0A0B4J276 109 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 LOC100506127A0A0U1RQW1 187 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 MFSD2BA6NFX1 497 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 SULT1C2O00338 296 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 REG1AP05451 166 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 C8orf88P0DMB2 117 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 DEFA4P12838 97 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 ELLP55199 621 aaPredicted RBP9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 ZNF818PQ6ZRF7 136 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 SLC16A13Q7RTY0 426 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 TMEM61Q8N0U2 210 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 UXS1Q8NBZ7 420 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 ZNF502Q8TBZ5 544 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 CACNG8Q8WXS5 425 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 HRASLSQ9HDD0 168 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 MLXQ9UH92 298 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 ANAPC10Q9UM13 185 aa9.35□□□□□ -0.91
SOX2-OT-247ENST00000628347 TRAV3A0A0B4J244 114 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 XRCC3O43542 346 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 CLEC3BP05452 202 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 PTBP1P26599 531 aaKnown RBP eCLIP9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 GNRHRP30968 328 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 FXYD4P59646 89 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 ANKRD55Q3KP44 614 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 DHRS11Q6UWP2 260 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 HSD17B13Q7Z5P4 300 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 CROCCP3Q8IVE0 287 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 VN1R17PQ8TDU5 208 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 QTRT1Q9BXR0 403 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 ZNF436Q9C0F3 470 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 COMMD5Q9GZQ3 224 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 TMEM140Q9NV12 185 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 THYN1Q9P016 225 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 S4R3C0 116 aa9.34□□□□□ -0.91
SOX2-OT-247ENST00000628347 ZNF320A2RRD8 509 aa9.33□□□□□ -0.92
SOX2-OT-247ENST00000628347 CYB5BO43169 146 aa9.33□□□□□ -0.92
SOX2-OT-247ENST00000628347 S1PR2O95136 353 aa9.33□□□□□ -0.92
SOX2-OT-247ENST00000628347 NAT1P18440 290 aa9.33□□□□□ -0.92
SOX2-OT-247ENST00000628347 HERV-K104P61576 105 aa9.33□□□□□ -0.92
SOX2-OT-247ENST00000628347 NEDD8Q15843 81 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms