RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 ITLN2Q8WWU7 325 aaPredicted RBP15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 NABP2Q9BQ15 211 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 TRAV1-1A0A0B4J248 108 aa15.96■□□□□ 0.15
CHRNA4-209ENST00000627000 PRSS46E5RG02 174 aa15.96■□□□□ 0.15
CHRNA4-209ENST00000627000 LY86O95711 162 aa15.96■□□□□ 0.15
CHRNA4-209ENST00000627000 RPP30P78346 268 aaKnown RBP15.96■□□□□ 0.15
CHRNA4-209ENST00000627000 ZNF787Q6DD87 383 aa15.96■□□□□ 0.15
CHRNA4-209ENST00000627000 RPP25LQ8N5L8 163 aaKnown RBP15.96■□□□□ 0.15
CHRNA4-209ENST00000627000 MBD3L1Q8WWY6 194 aa15.96■□□□□ 0.15
CHRNA4-209ENST00000627000 HARBI1Q96MB7 349 aa15.96■□□□□ 0.15
CHRNA4-209ENST00000627000 TMEM133Q9H2Q1 129 aa15.96■□□□□ 0.15
CHRNA4-209ENST00000627000 FBP1P09467 338 aa15.96■□□□□ 0.14
CHRNA4-209ENST00000627000 CD1BP29016 333 aa15.96■□□□□ 0.14
CHRNA4-209ENST00000627000 ICAM4Q14773 271 aa15.96■□□□□ 0.14
CHRNA4-209ENST00000627000 AKIRIN2Q53H80 203 aa15.96■□□□□ 0.14
CHRNA4-209ENST00000627000 RXFP4Q8TDU9 374 aa15.96■□□□□ 0.14
CHRNA4-209ENST00000627000 TMEM186Q96B77 213 aa15.96■□□□□ 0.14
CHRNA4-209ENST00000627000 FSTL3O95633 263 aa15.95■□□□□ 0.14
CHRNA4-209ENST00000627000 MEOX2P50222 304 aa15.95■□□□□ 0.14
CHRNA4-209ENST00000627000 C4orf17Q53FE4 359 aa15.95■□□□□ 0.14
CHRNA4-209ENST00000627000 Q8N7P7 452 aa15.95■□□□□ 0.14
CHRNA4-209ENST00000627000 PRNDQ9UKY0 176 aa15.95■□□□□ 0.14
CHRNA4-209ENST00000627000 SMCO3A2RU48 225 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 KBTBD11O94819 623 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 SCAF4O95104 1147 aaKnown RBP15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 FFAR4Q5NUL3 377 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 OSR1Q8TAX0 266 aaPredicted RBP15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 GNG13Q9P2W3 67 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 WDR83OSQ9Y284 106 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 HMGB3O15347 200 aaKnown RBP15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 RAB5BP61020 215 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 TMEM177Q53S58 311 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 ZNF506Q5JVG8 444 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 SLC24A4Q8NFF2 622 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 BET1LQ9NYM9 111 aa15.94■□□□□ 0.14
CHRNA4-209ENST00000627000 TEX50A0A1B0GTY4 177 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 MAP1LC3B2A6NCE7 125 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 SRP19P09132 144 aaKnown RBP15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 DEFA4P12838 97 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 AKR1C3P42330 323 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 ZNF137PP52743 207 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 WDR25Q64LD2 544 aaPredicted RBP15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 FAM71F2Q6NXP2 309 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 TGIF2LXQ8IUE1 241 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 LHX4Q969G2 390 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 FLYWCH2Q96CP2 140 aaKnown RBP15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 MAP1LC3BQ9GZQ8 125 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 ENY2Q9NPA8 101 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 PPIAL4CA0A0B4J2A2 164 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 C19orf84I3L1E1 186 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 CA2P00918 260 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 PPIAL4GP0DN37 164 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 NPY1RP25929 384 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 ZNF709Q8N972 641 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 OR8B3Q8NGG8 313 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 OR8B2Q96RD0 313 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 C20orf24Q9BUV8 137 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 SLC25A22Q9H936 323 aa15.93■□□□□ 0.14
CHRNA4-209ENST00000627000 ARHGAP32A7KAX9 2087 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 IGHV2-26A0A0B4J1V2 119 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 ZFP92A6NM28 416 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 FOLR2P14207 255 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 CEBPGP53567 150 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 RAB11AP62491 216 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 PRCDQ00LT1 54 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 TREML4Q6UXN2 200 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 OR10G4Q8NGN3 311 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 OR10G9Q8NGN4 311 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 OR10G7Q8NGN6 311 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 NEIL1Q96FI4 390 aaPredicted RBP15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 SMDT1Q9H4I9 107 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 ZNF257Q9Y2Q1 563 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 IGHV3-72A0A0B4J1Y9 119 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 LOC102723971A0A1B0GUV8 181 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 PAX6P26367 422 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 RITA1Q96K30 269 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 PLEKHA3Q9HB20 300 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 SLC39A9Q9NUM3 307 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 MIOXQ9UGB7 285 aa15.92■□□□□ 0.14
CHRNA4-209ENST00000627000 C22orf46C9J442 243 aa15.91■□□□□ 0.14
CHRNA4-209ENST00000627000 AWAT1Q58HT5 328 aa15.91■□□□□ 0.14
CHRNA4-209ENST00000627000 SOHLH1Q5JUK2 328 aa15.91■□□□□ 0.14
CHRNA4-209ENST00000627000 DTX2Q86UW9 622 aa15.91■□□□□ 0.14
CHRNA4-209ENST00000627000 PDPNQ86YL7 162 aa15.91■□□□□ 0.14
CHRNA4-209ENST00000627000 SMCO4Q9NRQ5 59 aa15.91■□□□□ 0.14
CHRNA4-209ENST00000627000 S100A8P05109 93 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 COX7A1P24310 79 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 CDKN1AP38936 164 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 ARSJQ5FYB0 599 aaPredicted RBP15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 CYB561D1Q8N8Q1 229 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 OR10W1Q8NGF6 305 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 OR4C13Q8NGP0 309 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 NEU4Q8WWR8 484 aaPredicted RBP15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 RAB1CQ92928 201 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 C1orf159Q96HA4 380 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 WASHC3Q9Y3C0 194 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 E7EUB6 86 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 C17orf112F2Z3M2 114 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 IGLV1-47P01700 117 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 IGLV2-23P01705 113 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms