RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 HIST1H1BP16401 226 aaKnown RBP17.16■□□□□ 0.34
SF1-220ENST00000626028 ATP5G2Q06055 141 aa17.16■□□□□ 0.34
SF1-220ENST00000626028 SPCS2Q15005 226 aa17.16■□□□□ 0.34
SF1-220ENST00000626028 TATDN3Q17R31 274 aa17.16■□□□□ 0.34
SF1-220ENST00000626028 HSD17B13Q7Z5P4 300 aaPredicted RBP17.16■□□□□ 0.34
SF1-220ENST00000626028 DMBX1Q8NFW5 382 aa17.16■□□□□ 0.34
SF1-220ENST00000626028 ABHD1Q96SE0 405 aa17.16■□□□□ 0.34
SF1-220ENST00000626028 COMMD5Q9GZQ3 224 aa17.16■□□□□ 0.34
SF1-220ENST00000626028 ANKRD34BA5PLL1 514 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 MARCH11A6NNE9 402 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 NOL3O60936 208 aaKnown RBP17.15■□□□□ 0.34
SF1-220ENST00000626028 S1PR2O95136 353 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 IFNA6P05013 189 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 PSMB6P28072 239 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 OR2B8PP59922 312 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 ZNF45Q02386 682 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 RNASE10Q5GAN6 216 aaKnown RBP17.15■□□□□ 0.34
SF1-220ENST00000626028 ZNF486Q96H40 463 aaPredicted RBP17.15■□□□□ 0.34
SF1-220ENST00000626028 FYTTD1Q96QD9 318 aaKnown RBP17.15■□□□□ 0.34
SF1-220ENST00000626028 B9D2Q9BPU9 175 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 TMEM140Q9NV12 185 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 KLK11Q9UBX7 282 aa17.15■□□□□ 0.34
SF1-220ENST00000626028 HMX3A6NHT5 357 aa17.14■□□□□ 0.33
SF1-220ENST00000626028 E7EUB6 86 aa17.14■□□□□ 0.33
SF1-220ENST00000626028 GABARAPH6UMI1 98 aa17.14■□□□□ 0.33
SF1-220ENST00000626028 CTRB1P17538 263 aa17.14■□□□□ 0.33
SF1-220ENST00000626028 CTRB2Q6GPI1 263 aa17.14■□□□□ 0.33
SF1-220ENST00000626028 OR52I2Q8NH67 350 aa17.14■□□□□ 0.33
SF1-220ENST00000626028 DYNC2LI1Q8TCX1 351 aa17.14■□□□□ 0.33
SF1-220ENST00000626028 LSM4Q9Y4Z0 139 aaKnown RBP17.14■□□□□ 0.33
SF1-220ENST00000626028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.13■□□□□ 0.33
SF1-220ENST00000626028 A0A1B0GW64 132 aa17.13■□□□□ 0.33
SF1-220ENST00000626028 RBMXL2O75526 392 aaKnown RBP17.13■□□□□ 0.33
SF1-220ENST00000626028 PTBP1P26599 531 aaKnown RBP eCLIP17.13■□□□□ 0.33
SF1-220ENST00000626028 EXOSC2Q13868 293 aaKnown RBP17.13■□□□□ 0.33
SF1-220ENST00000626028 C15orf32Q32M92 178 aa17.13■□□□□ 0.33
SF1-220ENST00000626028 OR9G4Q8NGQ1 327 aa17.13■□□□□ 0.33
SF1-220ENST00000626028 QTRT1Q9BXR0 403 aaKnown RBP17.13■□□□□ 0.33
SF1-220ENST00000626028 MIXL1Q9H2W2 232 aa17.13■□□□□ 0.33
SF1-220ENST00000626028 SIGLEC8Q9NYZ4 499 aa17.13■□□□□ 0.33
SF1-220ENST00000626028 CYB5BO43169 146 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 LPAR6P43657 344 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 TAS2R19P59542 299 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 RPEL1Q2QD12 228 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 ZNF585BQ52M93 769 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 LHFPL1Q86WI0 220 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 LAX1Q8IWV1 398 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 TMEM229BQ8NBD8 167 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 TSC22D3Q99576 134 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 FKBP11Q9NYL4 201 aa17.12■□□□□ 0.33
SF1-220ENST00000626028 CGB1A6NKQ9 187 aa17.11■□□□□ 0.33
SF1-220ENST00000626028 CTDSP2O14595 271 aa17.11■□□□□ 0.33
SF1-220ENST00000626028 CTDSPLO15194 276 aa17.11■□□□□ 0.33
SF1-220ENST00000626028 PRH1P02810 166 aa17.11■□□□□ 0.33
SF1-220ENST00000626028 CD74P04233 296 aa17.11■□□□□ 0.33
SF1-220ENST00000626028 AREGP15514 252 aa17.11■□□□□ 0.33
SF1-220ENST00000626028 RND3P61587 244 aa17.11■□□□□ 0.33
SF1-220ENST00000626028 FANCD2OSQ96PS1 177 aa17.11■□□□□ 0.33
SF1-220ENST00000626028 PRR25Q96S07 402 aa17.11■□□□□ 0.33
SF1-220ENST00000626028 IGLC7A0M8Q6 106 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 M0QYG6 137 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 SNAPC5O75971 98 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 OR2J3O76001 311 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 KRASP01116 189 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 IGLV1-51P01701 117 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 CD3DP04234 171 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 DEFA4P12838 97 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 DEFA5Q01523 94 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 CD69Q07108 199 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 PHLDA2Q53GA4 152 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 TBC1D26Q86UD7 250 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 OR1L8Q8NGR8 309 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 CXorf58Q96LI9 332 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 THYN1Q9P016 225 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 PEMTQ9UBM1 199 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 FBXL7Q9UJT9 491 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 PRNDQ9UKY0 176 aa17.1■□□□□ 0.33
SF1-220ENST00000626028 TRAV3A0A0B4J244 114 aa17.09■□□□□ 0.33
SF1-220ENST00000626028 TRBV12-3P01733 135 aa17.09■□□□□ 0.33
SF1-220ENST00000626028 RPA2P15927 270 aa17.09■□□□□ 0.33
SF1-220ENST00000626028 SYNJ2BPP57105 145 aa17.09■□□□□ 0.33
SF1-220ENST00000626028 OR5B3Q8NH48 314 aa17.09■□□□□ 0.33
SF1-220ENST00000626028 TERB2Q8NHR7 220 aa17.09■□□□□ 0.33
SF1-220ENST00000626028 SMIM4Q8WVI0 70 aa17.09■□□□□ 0.33
SF1-220ENST00000626028 ISOC1Q96CN7 298 aa17.09■□□□□ 0.33
SF1-220ENST00000626028 IGLV11-55A0A075B6I3 123 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 TRBV7-1A0A0A6YYK4 115 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 H3BMQ9 156 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 BMPR1BO00238 502 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 NHLRC4P0CG21 123 aaPredicted RBP17.08■□□□□ 0.32
SF1-220ENST00000626028 TRAPPC2P0DI81 140 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 TRAPPC2BP0DI82 140 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 MEF2DQ14814 521 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 ZFAND1Q8TCF1 268 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 EEF1AKMT3Q96AZ1 226 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 DIRAS2Q96HU8 199 aa17.08■□□□□ 0.32
SF1-220ENST00000626028 B3GALNT1O75752 331 aa17.07■□□□□ 0.32
SF1-220ENST00000626028 LY86O95711 162 aa17.07■□□□□ 0.32
SF1-220ENST00000626028 SPNP16150 400 aa17.07■□□□□ 0.32
SF1-220ENST00000626028 G6PCP35575 357 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms