RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ZNF436Q9C0F3 470 aaPredicted RBP8.16□□□□□ -1.1
DDX41-218ENST00000625286 ATG5Q9H1Y0 275 aa8.16□□□□□ -1.1
DDX41-218ENST00000625286 TAS2R8Q9NYW2 309 aa8.16□□□□□ -1.1
DDX41-218ENST00000625286 MRPL27Q9P0M9 148 aaKnown RBP8.16□□□□□ -1.1
DDX41-218ENST00000625286 TP53TG1Q9Y2A0 90 aa8.16□□□□□ -1.1
DDX41-218ENST00000625286 PKHD1P08F94 4074 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 TRBV7-1A0A0A6YYK4 115 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 DPPA5A6NC42 116 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 TNFSF12O43508 249 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 HLA-GP17693 338 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 FCGR2BP31994 310 aaPredicted RBP8.15□□□□□ -1.1
DDX41-218ENST00000625286 GPR183P32249 361 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 BMI1P35226 326 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 MFAP2P55001 183 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 RPL8P62917 257 aaKnown RBP8.15□□□□□ -1.1
DDX41-218ENST00000625286 ZNF124Q15973 351 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 ANKRD55Q3KP44 614 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 OR4A47Q6IF82 309 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 CNIH2Q6PI25 160 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 RBPMS2Q6ZRY4 209 aaKnown RBP8.15□□□□□ -1.1
DDX41-218ENST00000625286 PRSS48Q7RTY5 328 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 OR10W1Q8NGF6 305 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 OR4S2Q8NH73 311 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 HSD17B10Q99714 261 aaKnown RBP8.15□□□□□ -1.1
DDX41-218ENST00000625286 CCDC90BQ9GZT6 254 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 C5orf66Q9H5L9 145 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 CCL28Q9NRJ3 127 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 MRPS7Q9Y2R9 242 aaKnown RBP8.15□□□□□ -1.1
DDX41-218ENST00000625286 TPRKBQ9Y3C4 175 aa8.15□□□□□ -1.1
DDX41-218ENST00000625286 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 IGHV3OR16-8A0A075B7F1 116 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 METTL21EPA6NDL7 271 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 TMEM235A6NFC5 223 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 ANKRD65E5RJM6 399 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 F8W735 103 aaPredicted RBP8.14□□□□□ -1.11
DDX41-218ENST00000625286 PDCD5O14737 125 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 TSPAN4O14817 238 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 CTXN2P0C2S0 81 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 HIST1H1BP16401 226 aaKnown RBP8.14□□□□□ -1.11
DDX41-218ENST00000625286 CD36P16671 472 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 RPL35AP18077 110 aaKnown RBP8.14□□□□□ -1.11
DDX41-218ENST00000625286 ATF4P18848 351 aaPredicted RBP8.14□□□□□ -1.11
DDX41-218ENST00000625286 RAB3BP20337 219 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 GALP22466 123 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 PTBP1P26599 531 aaKnown RBP eCLIP8.14□□□□□ -1.11
DDX41-218ENST00000625286 TIMM50Q3ZCQ8 353 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 VSTM2AQ8TAG5 236 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 PHLDA1Q8WV24 401 aaPredicted RBP8.14□□□□□ -1.11
DDX41-218ENST00000625286 MARC2Q969Z3 335 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 CHRDL1Q9BU40 450 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 DCSTAMPQ9H295 470 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 BET1LQ9NYM9 111 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 ANXA10Q9UJ72 324 aa8.14□□□□□ -1.11
DDX41-218ENST00000625286 TRDV1A0A1B0GX56 115 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 UPK2O00526 184 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 SLC22A5O76082 557 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 DEFA4P12838 97 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 ADMP35318 185 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 ELLP55199 621 aaPredicted RBP8.13□□□□□ -1.11
DDX41-218ENST00000625286 WT1-ASQ06250 92 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 LGALS9CQ6DKI2 356 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 C22orf42Q6IC83 251 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 ZNF66Q6ZN08 573 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 GVQW1Q8N7I0 195 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 TMEM190Q8WZ59 177 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 CXorf58Q96LI9 332 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 SPAG8Q99932 426 aaPredicted RBP8.13□□□□□ -1.11
DDX41-218ENST00000625286 CENPOQ9BU64 300 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 MAP6D1Q9H9H5 199 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 NDUFB11Q9NX14 153 aa8.13□□□□□ -1.11
DDX41-218ENST00000625286 IGHV3-21A0A0B4J1V1 117 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 KIR2DL5BA0A0G2JN68 375 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 KIR2DL5BA0A0G2JPC4 375 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 OR2T8A6NH00 312 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 SULT1C2O00338 296 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 UBE2CO00762 179 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 TGOLN2O43493 480 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 ZNF207O43670 478 aaKnown RBP8.12□□□□□ -1.11
DDX41-218ENST00000625286 DHFRP00374 187 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 HRASP01112 189 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 APOC4P55056 127 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 PLET1Q6UQ28 207 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 APRG1Q8IVJ8 170 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 SPAG16Q8N0X2 631 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 KIR2DL5AQ8N109 375 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 OR5B3Q8NH48 314 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 OR4A5Q8NH83 315 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 KIR2DL5BQ8NHK3 375 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 KLK5Q9Y337 293 aaPredicted RBP8.12□□□□□ -1.11
DDX41-218ENST00000625286 UFC1Q9Y3C8 167 aa8.12□□□□□ -1.11
DDX41-218ENST00000625286 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
DDX41-218ENST00000625286 TEX50A0A1B0GTY4 177 aa8.11□□□□□ -1.11
DDX41-218ENST00000625286 FCER2P06734 321 aa8.11□□□□□ -1.11
DDX41-218ENST00000625286 CTSDP07339 412 aaPredicted RBP8.11□□□□□ -1.11
DDX41-218ENST00000625286 FCGR2CP31995 323 aa8.11□□□□□ -1.11
DDX41-218ENST00000625286 NANOS2P60321 138 aaKnown RBP8.11□□□□□ -1.11
DDX41-218ENST00000625286 TBCEQ15813 527 aaPredicted RBP8.11□□□□□ -1.11
DDX41-218ENST00000625286 POU2AF1Q16633 256 aa8.11□□□□□ -1.11
DDX41-218ENST00000625286 SLC38A6Q8IZM9 456 aa8.11□□□□□ -1.11
DDX41-218ENST00000625286 STPG3Q8N7X2 389 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms