RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 PRELID1Q9Y255 219 aa1.33□□□□□ -2.2
CDKL5-207ENST00000624700 C15orf41Q9Y2V0 281 aa1.33□□□□□ -2.2
CDKL5-207ENST00000624700 C2CD3Q4AC94 2353 aa1.33□□□□□ -2.2
CDKL5-207ENST00000624700 LAMB2P55268 1798 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 EYSQ5T1H1 3165 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 TRAV7A0A075B6U4 112 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 TRAV38-1A0A0B4J264 116 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 IGHV1-18A0A0C4DH31 117 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 A8MUN3 132 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 H7C2G1 150 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 SLC16A4O15374 487 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 PGLYRP1O75594 196 aaPredicted RBP1.32□□□□□ -2.2
CDKL5-207ENST00000624700 LGALS1P09382 135 aaKnown RBP1.32□□□□□ -2.2
CDKL5-207ENST00000624700 ZNF705DP0CH99 300 aaPredicted RBP1.32□□□□□ -2.2
CDKL5-207ENST00000624700 ZNF705BP0CI00 300 aaPredicted RBP1.32□□□□□ -2.2
CDKL5-207ENST00000624700 IL9P15248 144 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 MAGEA2P43356 314 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 EVX1P49640 407 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 POLR2GP62487 172 aaKnown RBP eCLIP1.32□□□□□ -2.2
CDKL5-207ENST00000624700 CAV1Q03135 178 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 PPP1R1AQ13522 171 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 FAM151BQ6UXP7 276 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 HIST2H3AQ71DI3 136 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 TBC1D19Q8N5T2 526 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 TMEM161BQ8NDZ6 487 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 OR2T27Q8NH04 317 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 MBD3L1Q8WWY6 194 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 IMMP2LQ96T52 175 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 RSL24D1Q9UHA3 163 aaKnown RBP1.32□□□□□ -2.2
CDKL5-207ENST00000624700 ANAPC10Q9UM13 185 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 AMMECR1Q9Y4X0 333 aaPredicted RBP1.32□□□□□ -2.2
CDKL5-207ENST00000624700 RYR1P21817 5038 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 MED13Q9UHV7 2174 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 MAP3K5Q99683 1374 aa1.32□□□□□ -2.2
CDKL5-207ENST00000624700 SPG11Q96JI7 2443 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 OR4C45A6NMZ5 311 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 COCHO43405 550 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 TYMSP04818 313 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 GPX2P18283 190 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 CCR2P41597 374 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 TPM4P67936 248 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 MLLT11Q13015 90 aaPredicted RBP1.31□□□□□ -2.2
CDKL5-207ENST00000624700 NDUFA5Q16718 116 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 LRRN1Q6UXK5 716 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 ROPN1LQ96C74 230 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 MAP1LC3AQ9H492 121 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 FGFR1OP2Q9NVK5 253 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 C3orf18Q9UK00 162 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 POLQO75417 2590 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 CFAP46Q8IYW2 2715 aa1.31□□□□□ -2.2
CDKL5-207ENST00000624700 TTC28Q96AY4 2481 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 TENM4Q6N022 2769 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 A0A1B0GV50 99 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 LRRN3E7EW58 273 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 COX5BP10606 129 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 MSNP26038 577 aaKnown RBP1.3□□□□□ -2.2
CDKL5-207ENST00000624700 RAB14P61106 215 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 FABP9Q0Z7S8 132 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 ELOBQ15370 118 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 NNATQ16517 81 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 TMEM155Q4W5P6 130 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 ACSM3Q53FZ2 586 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 DCXRQ7Z4W1 244 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 UMODL1-AS1Q8N2C9 162 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 RPP25LQ8N5L8 163 aaKnown RBP1.3□□□□□ -2.2
CDKL5-207ENST00000624700 CHST6Q9GZX3 395 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 RBM7Q9Y580 266 aaKnown RBP1.3□□□□□ -2.2
CDKL5-207ENST00000624700 ATP6V1DQ9Y5K8 247 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 C9orf84Q5VXU9 1444 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 SCAF11Q99590 1463 aaKnown RBP1.3□□□□□ -2.2
CDKL5-207ENST00000624700 HEATR5BQ9P2D3 2071 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 FREM1Q5H8C1 2179 aa1.3□□□□□ -2.2
CDKL5-207ENST00000624700 IGSF10Q6WRI0 2623 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 HEATR5AQ86XA9 2040 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 IGKV2-40A0A087WW87 121 aaPredicted RBP1.29□□□□□ -2.2
CDKL5-207ENST00000624700 TRBV6-5A0A0K0K1A5 114 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 M0QZ92 97 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 CIAO1O76071 339 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 IGKV2D-40P01614 121 aaPredicted RBP1.29□□□□□ -2.2
CDKL5-207ENST00000624700 NFYAP23511 347 aaPredicted RBP1.29□□□□□ -2.2
CDKL5-207ENST00000624700 RPL12P30050 165 aaKnown RBP1.29□□□□□ -2.2
CDKL5-207ENST00000624700 RPL28P46779 137 aaKnown RBP1.29□□□□□ -2.2
CDKL5-207ENST00000624700 RAB13P51153 203 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 AP2S1P53680 142 aaPredicted RBP1.29□□□□□ -2.2
CDKL5-207ENST00000624700 EMX1Q04741 257 aaPredicted RBP1.29□□□□□ -2.2
CDKL5-207ENST00000624700 DMTNQ08495 405 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 SSX8Q7RTT4 187 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 COMMD7Q86VX2 200 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 HSPB9Q9BQS6 159 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 FAM96AQ9H5X1 160 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 MED9Q9NWA0 146 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 SOX21Q9Y651 276 aaPredicted RBP1.29□□□□□ -2.2
CDKL5-207ENST00000624700 PXMP4Q9Y6I8 212 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 CECR2Q9BXF3 1484 aa1.29□□□□□ -2.2
CDKL5-207ENST00000624700 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
CDKL5-207ENST00000624700 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
CDKL5-207ENST00000624700 A0A0D9SEW6 157 aa1.28□□□□□ -2.2
CDKL5-207ENST00000624700 TMEM269A0A1B0GVZ9 245 aa1.28□□□□□ -2.2
CDKL5-207ENST00000624700 TRAPPC13A5PLN9 417 aa1.28□□□□□ -2.2
CDKL5-207ENST00000624700 MEIS3P1A6NDR6 274 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms