RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 APCSP02743 223 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 OR10J4P0C629 311 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 CX3CL1P78423 397 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 OR52L2PQ8NGH6 319 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 OR4P4Q8NGL7 312 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 SEPSECSQ9HD40 501 aaKnown RBP12.66□□□□□ -0.38
PMS1-221ENST00000624204 CDC42EP3Q9UKI2 254 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 RPH3ALQ9UNE2 315 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 CADP27708 2225 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 SH2D7A6NKC9 451 aaPredicted RBP12.66□□□□□ -0.38
PMS1-221ENST00000624204 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 NEURL1O76050 574 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 NUDT3O95989 172 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 CRYBB3P26998 211 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 TRIP6Q15654 476 aaKnown RBP12.66□□□□□ -0.38
PMS1-221ENST00000624204 AMMECR1LQ6DCA0 310 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 CORO2AQ92828 525 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 TXNDC17Q9BRA2 123 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 SSBP4Q9BWG4 385 aaPredicted RBP12.66□□□□□ -0.38
PMS1-221ENST00000624204 PLCE1Q9P212 2302 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 HELTA6NFD8 242 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 TNXAQ16473 311 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 KRTAP27-1Q3LI81 207 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 SLC24A4Q8NFF2 622 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 SF3B5Q9BWJ5 86 aaKnown RBP12.65□□□□□ -0.38
PMS1-221ENST00000624204 CLEC5AQ9NY25 188 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 MED12LQ86YW9 2145 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 IGLV3-12A0A075B6K2 115 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 TRBV6-6A0A0A6YYG2 114 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 A0A0G2JMM0 328 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 A0A1W2PPB8 328 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 OR5B21A6NL26 309 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 KIR3DP1A8MWS1 328 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 OR2H2O95918 312 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 CGAP01215 116 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 USF1P22415 310 aaPredicted RBP12.65□□□□□ -0.38
PMS1-221ENST00000624204 MS4A5Q9H3V2 200 aa12.65□□□□□ -0.38
PMS1-221ENST00000624204 VWC2Q2TAL6 325 aa12.65□□□□□ -0.39
PMS1-221ENST00000624204 TIGITQ495A1 244 aa12.65□□□□□ -0.39
PMS1-221ENST00000624204 TREML4Q6UXN2 200 aa12.65□□□□□ -0.39
PMS1-221ENST00000624204 ABHD12Q8N2K0 398 aa12.65□□□□□ -0.39
PMS1-221ENST00000624204 OR4F17Q8NGA8 305 aa12.65□□□□□ -0.39
PMS1-221ENST00000624204 NUDT11Q96G61 164 aa12.65□□□□□ -0.39
PMS1-221ENST00000624204 PRRG4Q9BZD6 226 aa12.65□□□□□ -0.39
PMS1-221ENST00000624204 ZNF331Q9NQX6 463 aaPredicted RBP12.65□□□□□ -0.39
PMS1-221ENST00000624204 ZNF716A6NP11 495 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 CER1O95813 267 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 GNG3P63215 75 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 ZNF645Q8N7E2 425 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 NINJ1Q92982 152 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 MGST2Q99735 147 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 TNCP24821 2201 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 GJE1A6NN92 205 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 HLA-DQA1P01909 254 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 AMY1AP04745 511 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 GATA2P23769 480 aaPredicted RBP12.64□□□□□ -0.39
PMS1-221ENST00000624204 EDDM3AQ14507 147 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 MUC15Q8N387 334 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 PNKDQ8N490 385 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 OR10D3Q8NH80 312 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 GGTLC1Q9BX51 225 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 CFHR5Q9BXR6 569 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 CSTL1Q9H114 145 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 KCNIP1Q9NZI2 227 aa12.64□□□□□ -0.39
PMS1-221ENST00000624204 SAA2-SAA4A0A096LPE2 208 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 SLAQ13239 276 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 ZNF718Q3SXZ3 478 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 Q5PR19 223 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 EBLN2Q6P2I7 272 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 CHODLQ9H9P2 273 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 CA7P43166 264 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 HYAL1Q12794 435 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 MOB1BQ7L9L4 216 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 EPOPA6NHQ4 379 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 NPIPB11E5RHQ5 1161 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 MT-CO2P00403 227 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 UQCRFS1P47985 274 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 UBE2G1P62253 170 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 C18orf32Q8TCD1 76 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 C5orf30Q96GV9 206 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 C12orf49Q9H741 205 aa12.63□□□□□ -0.39
PMS1-221ENST00000624204 FAM181BA6NEQ2 426 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 DKK1O94907 266 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 OPRK1P41145 380 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 FOXA3P55318 350 aaPredicted RBP12.62□□□□□ -0.39
PMS1-221ENST00000624204 LHFPL4Q7Z7J7 247 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 LINC00596Q86U02 117 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 OR2Y1Q8NGV0 311 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 FAM216AQ8WUB2 273 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 NEUROG1Q92886 237 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 GP6Q9HCN6 339 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 PRDM6Q9NQX0 595 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 RARRES3Q9UL19 164 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 K7ERU9 68 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 CDIPTO14735 213 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 OR7C2O60412 319 aa12.62□□□□□ -0.39
PMS1-221ENST00000624204 MRPL33O75394 65 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms