RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 AICDAQ9GZX7 198 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 TNFRSF19Q9NS68 423 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 C4orf51C9J302 202 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 TSPAN7P41732 249 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 LGALS7P47929 136 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 GAB4Q2WGN9 574 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 C10orf91Q5T1B1 145 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 RPP21Q9H633 154 aaKnown RBP7.6□□□□□ -1.19
VCL-206ENST00000623461 CELA2BP08218 269 aaPredicted RBP7.6□□□□□ -1.19
VCL-206ENST00000623461 ESDP10768 282 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 SSTR5P35346 364 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 IGLV3-21P80748 117 aaPredicted RBP7.6□□□□□ -1.19
VCL-206ENST00000623461 C10orf128Q5T292 105 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 TMEM54Q969K7 222 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 FMC1Q96HJ9 113 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 LYZL6O75951 148 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 ACSF3Q4G176 576 aaPredicted RBP7.6□□□□□ -1.19
VCL-206ENST00000623461 TMEM240Q5SV17 173 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 RBPMS2Q6ZRY4 209 aaKnown RBP7.6□□□□□ -1.19
VCL-206ENST00000623461 SFTPA2Q8IWL1 248 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 SFTPA1Q8IWL2 248 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 CYSLTR1Q9Y271 337 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 H7C2G1 150 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 RPL8P62917 257 aaKnown RBP7.59□□□□□ -1.19
VCL-206ENST00000623461 FOXC1Q12948 553 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 PPIAL4DF5H284 164 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 TFF3Q07654 80 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 C2orf83Q53S99 150 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 RASL11AQ6T310 242 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 PRELID3AQ96N28 172 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 IGHV1-69-2A0A0G2JMI3 117 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 ITGB1BP1O14713 200 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 ATXN7O15265 892 aaPredicted RBP7.59□□□□□ -1.19
VCL-206ENST00000623461 FTH1P19P0C7X4 201 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 ZNF788Q6ZQV5 615 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 GPHA2Q96T91 129 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 PEX7O00628 323 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 RPL27AP46776 148 aaKnown RBP7.59□□□□□ -1.19
VCL-206ENST00000623461 FOXA3P55318 350 aaPredicted RBP7.59□□□□□ -1.19
VCL-206ENST00000623461 ID3Q02535 119 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 FADS6Q8N9I5 356 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 ZNF418Q8TF45 676 aaPredicted RBP7.59□□□□□ -1.19
VCL-206ENST00000623461 UBTD1Q9HAC8 227 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 SPANXA1Q9NS26 97 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 SLC25A10Q9UBX3 287 aaPredicted RBP7.59□□□□□ -1.19
VCL-206ENST00000623461 INSIG2Q9Y5U4 225 aa7.59□□□□□ -1.19
VCL-206ENST00000623461 A0A1B0GUT8 65 aa7.59□□□□□ -1.2
VCL-206ENST00000623461 DEFB109BQ30KR1 87 aa7.59□□□□□ -1.2
VCL-206ENST00000623461 MOGAT3Q86VF5 341 aa7.59□□□□□ -1.2
VCL-206ENST00000623461 CGAP01215 116 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 COL9A1P20849 921 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 ANOS1P23352 680 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 CKS1BP61024 79 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 IZUMO4Q1ZYL8 232 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 FAM89BQ8N5H3 189 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 OR9G4Q8NGQ1 327 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 C20orf144Q9BQM9 153 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 ZNF703Q9H7S9 590 aaPredicted RBP7.58□□□□□ -1.2
VCL-206ENST00000623461 TMPRSS2O15393 492 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 MRPS16Q9Y3D3 137 aaKnown RBP7.58□□□□□ -1.2
VCL-206ENST00000623461 C1QTNF9P0C862 333 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 CCL3P10147 92 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 TMEM78Q5T7P6 136 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 TMEM108Q6UXF1 575 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 ATP5L2Q7Z4Y8 100 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 C1RLQ9NZP8 487 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 LOC101059948A0A1B0GTJ6 334 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 PTGDSP41222 190 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 FBXW9Q5XUX1 488 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 LHX8Q68G74 356 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 PCSK4Q6UW60 755 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 BHLHA15Q7RTS1 189 aaPredicted RBP7.58□□□□□ -1.2
VCL-206ENST00000623461 EAF1Q96JC9 268 aaPredicted RBP7.58□□□□□ -1.2
VCL-206ENST00000623461 TMEM160Q9NX00 188 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 EREGO14944 169 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 MPV17P39210 176 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 RND2P52198 227 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 C1QL2Q7Z5L3 287 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 MDP1Q86V88 176 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 ABHD12Q8N2K0 398 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 SEMA5BQ9P283 1151 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 KLF2Q9Y5W3 355 aaPredicted RBP7.58□□□□□ -1.2
VCL-206ENST00000623461 ODAMA1E959 279 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 NXPH1P58417 271 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 KRTCAP3Q53RY4 240 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 COX11Q9Y6N1 276 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 SPTBN2O15020 2390 aa7.58□□□□□ -1.2
VCL-206ENST00000623461 A0A0J9YW62 118 aa7.57□□□□□ -1.2
VCL-206ENST00000623461 A0A1B0GWJ7 208 aa7.57□□□□□ -1.2
VCL-206ENST00000623461 CIRBPQ14011 172 aaKnown RBP7.57□□□□□ -1.2
VCL-206ENST00000623461 RAB1CQ92928 201 aa7.57□□□□□ -1.2
VCL-206ENST00000623461 SLC25A2Q9BXI2 301 aa7.57□□□□□ -1.2
VCL-206ENST00000623461 DIDO1Q9BTC0 2240 aaKnown RBP7.57□□□□□ -1.2
VCL-206ENST00000623461 IGHV2-5P01817 119 aa7.57□□□□□ -1.2
VCL-206ENST00000623461 SAMD5Q5TGI4 173 aa7.57□□□□□ -1.2
VCL-206ENST00000623461 TEX38Q6PEX7 206 aa7.57□□□□□ -1.2
VCL-206ENST00000623461 LHFPL1Q86WI0 220 aa7.57□□□□□ -1.2
VCL-206ENST00000623461 CACNA1DQ01668 2161 aa7.57□□□□□ -1.2
VCL-206ENST00000623461 A0A1W2PQM1 296 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms