RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 FAM166BA8MTA8 275 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 BMPR1BO00238 502 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 MT-CO2P00403 227 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 REG1AP05451 166 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 CELA3AP09093 270 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 OR10J4P0C629 311 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 TSPOP30536 169 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 VDAC2P45880 294 aaPredicted RBP11.69□□□□□ -0.54
LDB3-209ENST00000623056 GNG4P50150 75 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 TCL1AP56279 114 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 RHOBP62745 196 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 UBE2V1Q13404 147 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 PRAMEF5Q5TYX0 476 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 PRAMEF6Q5VXH4 476 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 ATOH7Q8N100 152 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
LDB3-209ENST00000623056 GP6Q9HCN6 339 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 PSG11Q9UQ72 335 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 LSM4Q9Y4Z0 139 aaKnown RBP11.69□□□□□ -0.54
LDB3-209ENST00000623056 DEFB108AA8MXU0 73 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 CA2P00918 260 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 GRPP07492 148 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 FXYD3Q14802 87 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 MAJINQ3KP22 176 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 SAPCD1Q5SSQ6 148 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 DOLPP1Q86YN1 238 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 STPG3Q8N7X2 389 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 TSKUQ8WUA8 353 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 COQ2Q96H96 371 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 COX11Q9Y6N1 276 aa11.69□□□□□ -0.54
LDB3-209ENST00000623056 K7EP13 123 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 GFRA3O60609 400 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 CGAP01215 116 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 AREGP15514 252 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 OTX2P32243 289 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 SSTR5P35346 364 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 PI4KAP42356 2102 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 CYB561P49447 251 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 HOXA4Q00056 320 aaPredicted RBP11.68□□□□□ -0.54
LDB3-209ENST00000623056 FOXF2Q12947 444 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 PMS2CLQ68D20 193 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 ABHD12Q8N2K0 398 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 OR4P4Q8NGL7 312 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 MRPS16Q9Y3D3 137 aaKnown RBP11.68□□□□□ -0.54
LDB3-209ENST00000623056 ZDBF2Q9HCK1 2354 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 HELTA6NFD8 242 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 FCGR3BO75015 233 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 TFF1P04155 84 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 AMY1AP04745 511 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 GABRA2P47869 451 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 ALKBH6Q3KRA9 238 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 COX19Q49B96 90 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 ZNF766Q5HY98 468 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 Q6ZR03 302 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 C19orf35Q6ZS72 473 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 PPP1R32Q7Z5V6 425 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 VASH2Q86V25 355 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 MDP1Q86V88 176 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 SAP25Q8TEE9 199 aa11.68□□□□□ -0.54
LDB3-209ENST00000623056 FREM2Q5SZK8 3169 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 HCFC1P51610 2035 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 WNT9BO14905 357 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 CFIP05156 583 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 NTF3P20783 257 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 CRYBB3P26998 211 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 COTL1Q14019 142 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 SPINK14Q6IE38 97 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 LCN12Q6JVE5 192 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 MRPL54Q6P161 138 aaKnown RBP11.67□□□□□ -0.54
LDB3-209ENST00000623056 ZNF738Q8NE65 137 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 RFESDQ8TAC1 157 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 Q8TCH9 128 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 BORCS7Q96B45 105 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 NPVFQ9HCQ7 196 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 OSTCQ9NRP0 149 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 SLC35D1Q9NTN3 355 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 BET1LQ9NYM9 111 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 CDC42EP3Q9UKI2 254 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 PTPRBP23467 1997 aa11.67□□□□□ -0.54
LDB3-209ENST00000623056 PATE3B3GLJ2 98 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 HLA-DQA1P01909 254 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 CDKN1BP46527 198 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 STUMQ69YW2 141 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 VKORC1L1Q8N0U8 176 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 LYG1Q8N1E2 194 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 TPRX1Q8N7U7 411 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 ZNF439Q8NDP4 499 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 IFI44Q8TCB0 444 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 HES4Q9HCC6 221 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 BOKQ9UMX3 212 aaPredicted RBP11.66□□□□□ -0.54
LDB3-209ENST00000623056 LOC105371242A0A075B767 164 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 FAM90A9PA6NNJ1 464 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 DUTP33316 252 aaKnown RBP11.66□□□□□ -0.54
LDB3-209ENST00000623056 MORN2Q502X0 79 aa11.66□□□□□ -0.54
LDB3-209ENST00000623056 GCNT2Q8N0V5 402 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms