RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 IL15RAQ13261 267 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 ZNF146Q15072 292 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 RNF138Q8WVD3 245 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 TIMM9Q9Y5J7 89 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 OTOGLQ3ZCN5 2332 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 TRAV34A0A0B4J273 112 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 RRHO14718 337 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 SS18L1O75177 396 aaPredicted RBP10.75□□□□□ -0.69
MSH6-215ENST00000622629 DKK1O94907 266 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 CRYBB3P26998 211 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 HEPN1Q6WQI6 88 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 PDPNQ86YL7 162 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 RPP25LQ8N5L8 163 aaKnown RBP10.75□□□□□ -0.69
MSH6-215ENST00000622629 MS4A5Q9H3V2 200 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 IDI2-AS1Q9NZ38 188 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 C1QTNF9BB2RNN3 333 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 CA2P00918 260 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 RNASEKQ6P5S7 137 aaKnown RBP10.75□□□□□ -0.69
MSH6-215ENST00000622629 OR8I2Q8N0Y5 310 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 STPG3Q8N7X2 389 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 GNB4Q9HAV0 340 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 A0A087WWC5 75 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
MSH6-215ENST00000622629 ARL16Q0P5N6 197 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 GAMTQ14353 236 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 TIMM23BQ5SRD1 257 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 C10orf113Q5VZT2 155 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 Q6P435 159 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 GRIFINA4D1Z8 144 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 SLC25A17O43808 307 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 HOXA5P20719 270 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 CCKARP32238 428 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 PRRX1P54821 245 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 ERVFRD-1P60508 538 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 PKIAP61925 76 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 FXYD3Q14802 87 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 PQLC2Q6ZP29 291 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 CHRDL1Q9BU40 450 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 SEBOXQ9HB31 216 aaPredicted RBP10.74□□□□□ -0.69
MSH6-215ENST00000622629 CDX4O14627 284 aaPredicted RBP10.74□□□□□ -0.69
MSH6-215ENST00000622629 CSN1S1P47710 185 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 RPL23P62829 140 aaKnown RBP10.74□□□□□ -0.69
MSH6-215ENST00000622629 SRSF7Q16629 238 aaKnown RBP eCLIP10.74□□□□□ -0.69
MSH6-215ENST00000622629 HLA-DRB5Q30154 266 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 FAM53AQ6NSI3 398 aaPredicted RBP10.74□□□□□ -0.69
MSH6-215ENST00000622629 NHLRC2Q8NBF2 726 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 MDS2Q8NDY4 140 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 SGK494Q96LW2 274 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 PAM16Q9Y3D7 125 aa10.74□□□□□ -0.69
MSH6-215ENST00000622629 SERTM2A0A1B0GWG4 89 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 PGPEP1LA6NFU8 196 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 C5orf52A6NGY3 159 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST1H2BKO60814 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST1H2BJP06899 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST1H2BOP23527 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 GATA2P23769 480 aaPredicted RBP10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST1H2BBP33778 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 KIR2DL2P43627 348 aaPredicted RBP10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST1H2BDP58876 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST1H2BCP62807 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST2H2BEQ16778 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 KIAA1644Q3SXP7 199 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.73□□□□□ -0.69
MSH6-215ENST00000622629 OR5AU1Q8NGC0 362 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST1H2BHQ93079 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST1H2BNQ99877 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HIST1H2BMQ99879 126 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 ZDHHC8Q9ULC8 765 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 UNC80Q8N2C7 3258 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 REG1AP05451 166 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 C1orf162Q8NEQ5 155 aaPredicted RBP10.73□□□□□ -0.69
MSH6-215ENST00000622629 NABP2Q9BQ15 211 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 RNF24Q9Y225 148 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 YLPM1P49750 1951 aaKnown RBP10.73□□□□□ -0.69
MSH6-215ENST00000622629 NOTCH3Q9UM47 2321 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 FOXI3A8MTJ6 420 aaPredicted RBP10.73□□□□□ -0.69
MSH6-215ENST00000622629 SRP14P37108 136 aaKnown RBP10.73□□□□□ -0.69
MSH6-215ENST00000622629 OR4A47Q6IF82 309 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 SSC4DQ8WTU2 575 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 HSPB7Q9UBY9 170 aa10.73□□□□□ -0.69
MSH6-215ENST00000622629 NDUFS6O75380 124 aaKnown RBP10.72□□□□□ -0.69
MSH6-215ENST00000622629 IL6RP08887 468 aaPredicted RBP10.72□□□□□ -0.69
MSH6-215ENST00000622629 USF1P22415 310 aaPredicted RBP10.72□□□□□ -0.69
MSH6-215ENST00000622629 GCHFRP30047 84 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 GFI1BQ5VTD9 330 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 SPSB3Q6PJ21 355 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 VN1R17PQ8TDU5 208 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 MUC22E2RYF6 1773 aaPredicted RBP10.72□□□□□ -0.69
MSH6-215ENST00000622629 IGHV1-18A0A0C4DH31 117 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 OR9G9P0C7N8 305 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 IGFBP2P18065 325 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 MFAP2P55001 183 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 MORN2Q502X0 79 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 NOL4LQ96MY1 436 aaPredicted RBP10.72□□□□□ -0.69
MSH6-215ENST00000622629 PAXXQ9BUH6 204 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 CHD9Q3L8U1 2897 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 WDR73Q6P4I2 378 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 TBX15Q96SF7 602 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 CITED1Q99966 193 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 ELOVL1Q9BW60 279 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms