RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 AVPP01185 164 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 P2RY1P47900 373 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 FLI1Q01543 452 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 OR2F1Q13607 317 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 EBI3Q14213 229 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 ACOT7LQ6ZUV0 252 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 THNSL2Q86YJ6 484 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 TEX45Q8NA69 505 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 OR2T10Q8NGZ9 312 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 TMEM167AQ8TBQ9 72 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 FOXA2Q9Y261 457 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 ZNF257Q9Y2Q1 563 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 ITPR2Q14571 2701 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 SSSCA1O60232 199 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 IGKV1D-33P01593 117 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 IGKV1-33P01594 117 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 FAM106CPP0CH98 169 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 IGHV4-38-2P0DP08 117 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 TAS2R30P59541 319 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 SPCS3P61009 180 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 VAMP2P63027 116 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 CLRN3Q8NCR9 226 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 AQP10Q96PS8 301 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 CIB3Q96Q77 187 aaPredicted RBP11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 QTRT1Q9BXR0 403 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 MAGT1Q9H0U3 335 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 MEGF9Q9H1U4 602 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 C11orf1Q9H5F2 150 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 WSB1Q9Y6I7 421 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 CREBBPQ92793 2442 aa11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 MAP1AP78559 2803 aaPredicted RBP11.42□□□□□ -0.58
CLTCL1-212ENST00000622493 TRAV3A0A0B4J244 114 aa11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 RNF222A6NCQ9 220 aa11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 GPR137BO60478 399 aa11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 IFNA17P01571 189 aa11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 DYNLT3P51808 116 aa11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 HSPE1P61604 102 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 RPL8P62917 257 aaKnown RBP11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 KLF17Q5JT82 389 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 LINC00518Q8N0U6 118 aa11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 OR5B3Q8NH48 314 aa11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 EAF1Q96JC9 268 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 RITA1Q96K30 269 aa11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 CSMD1Q96PZ7 3565 aa11.41□□□□□ -0.58
CLTCL1-212ENST00000622493 DNASE2O00115 360 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 SLC25A17O43808 307 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 NXPH3O95157 252 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 CRYGBP07316 175 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 SNRNP70P08621 437 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 OR2B8PP59922 312 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 RPL23AP62750 156 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 PSG5Q15238 335 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 RUSC1-AS1Q66K80 236 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 BRD3OSQ6XYD6 125 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 CIARTQ8N365 385 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 OR2C3Q8N628 320 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 TEX29Q8N6K0 151 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 NPBQ8NG41 125 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 NANPQ8TBE9 248 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 RBMXL1Q96E39 390 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 SMIM8Q96KF7 97 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 RBKSQ9H477 322 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 FAM96BQ9Y3D0 163 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 APOC3P02656 99 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 HKR1P10072 659 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 RPL12P30050 165 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 HES1Q14469 280 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 KCNRGQ8N5I3 272 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 DTD1Q8TEA8 209 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 SIGLEC9Q9Y336 463 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
CLTCL1-212ENST00000622493 CCDC168Q8NDH2 2452 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 CEBPZOSA8MTT3 80 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 RRHO14718 337 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 NBR2O15453 112 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 NDUFA3O95167 84 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 FBP1P09467 338 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 PAX6P26367 422 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 MAS1LP35410 378 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 PAX9P55771 341 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 MMDQ15546 238 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 UQCC3Q6UW78 93 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 PPP1R27Q86WC6 154 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 MMD2Q8IY49 270 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 Q8N6K4 173 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 ST8SIA2Q92186 375 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 PHYHIPLQ96FC7 376 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 CLCC1Q96S66 551 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 COMMD5Q9GZQ3 224 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 SLC25A31Q9H0C2 315 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 KIAA1456Q9P272 454 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 METTL1Q9UBP6 276 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 TCF19Q9Y242 345 aa11.39□□□□□ -0.59
CLTCL1-212ENST00000622493 A0A0U1RQK1 487 aa11.38□□□□□ -0.59
CLTCL1-212ENST00000622493 TEX46H3BTG2 121 aa11.38□□□□□ -0.59
CLTCL1-212ENST00000622493 SMAD7O15105 426 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-212ENST00000622493 TMEM50AO95807 157 aa11.38□□□□□ -0.59
CLTCL1-212ENST00000622493 FSHBP01225 129 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms