RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 INO80CQ6PI98 192 aaPredicted RBP6.28□□□□□ -1.4
TRIM49B-202ENST00000622138 RASL11AQ6T310 242 aa6.28□□□□□ -1.4
TRIM49B-202ENST00000622138 NABP1Q96AH0 204 aa6.28□□□□□ -1.4
TRIM49B-202ENST00000622138 PSG8Q9UQ74 426 aa6.28□□□□□ -1.4
TRIM49B-202ENST00000622138 ZNF835Q9Y2P0 537 aa6.28□□□□□ -1.4
TRIM49B-202ENST00000622138 TRBV20OR9-2A0A075B6H5 130 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 TRAV38-1A0A0B4J264 116 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 H3BUT2 72 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 ANGPTL7O43827 346 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 HBZP02008 142 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 ATP5G3P48201 142 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 GRB2P62993 217 aaKnown RBP6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 TGFBR3Q03167 851 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 TLE1Q04724 770 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 BPIFA4PQ86YQ2 179 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 FADS6Q8N9I5 356 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 CT55Q8WUE5 264 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 PP6455Q8WZ26 134 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 NAT6Q93015 286 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 TMEM45BQ96B21 275 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 ZNF837Q96EG3 531 aaPredicted RBP6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 GPR82Q96P67 336 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 UCN2Q96RP3 112 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 TMEM147Q9BVK8 224 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 SAP30LQ9HAJ7 183 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 PIGLQ9Y2B2 252 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 TNFRSF18Q9Y5U5 241 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 ARL2-SNX15V9GYD0 113 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 V9GYV3 84 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 PGPEP1LA6NFU8 196 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 C19orf67A6NJJ6 358 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 HMGB3O15347 200 aaKnown RBP6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 SCRG1O75711 98 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 DHRS3O75911 302 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 NXPH3O95157 252 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 CLDN1O95832 211 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 HERV-K104P63124 156 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 PSG7Q13046 419 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 KIAA1644Q3SXP7 199 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 PLCXD3Q63HM9 321 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 GUSBP11Q6P575 273 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 SPATA12Q7Z6I5 190 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 OCC1Q8TAD7 63 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 C5orf30Q96GV9 206 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 TMEM204Q9BSN7 226 aa6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 CHCHD2Q9Y6H1 151 aaPredicted RBP6.27□□□□□ -1.41
TRIM49B-202ENST00000622138 SDK2Q58EX2 2172 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 IGKV1-27A0A075B6S5 117 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 A0A087X0K7 114 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 A0A1W2PQM1 296 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 SPRY1O43609 319 aaPredicted RBP6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 ZFAND5O76080 213 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 CRYAAP02489 173 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 APCSP02743 223 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 COX8AP10176 69 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 FABP2P12104 132 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 TNXAQ16473 311 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 CEACAM21Q3KPI0 293 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 TMEM177Q53S58 311 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 Q6ZPA2 131 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 Q6ZS49 121 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 C2orf91Q6ZV80 131 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 OR1F12Q8NHA8 337 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 WIPF2Q8TF74 440 aaPredicted RBP6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 C11orf52Q96A22 123 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 GALMQ96C23 342 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 PERPQ96FX8 193 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 OR2D2Q9H210 308 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 CRIM1Q9NZV1 1036 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 TP73-AS1Q9UF72 201 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 SS18L2Q9UHA2 77 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 ERG28Q9UKR5 140 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 VPS13AQ96RL7 3174 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 FRYLO94915 3013 aa6.26□□□□□ -1.41
TRIM49B-202ENST00000622138 LY6G6EA0A0G2JKS1 128 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 ZNF716A6NP11 495 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 FAM90A26D6RGX4 464 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 SLC17A3O00476 420 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 ISLRO14498 428 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 OR9G9P0C7N8 305 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 SP9P0CG40 484 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 EGR1P18146 543 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 TMEM211Q6ICI0 200 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 BRICD5Q6PL45 260 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 TMEM14EPQ6UXP3 125 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 FOXL2NBQ6ZUU3 175 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 CACNG8Q8WXS5 425 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 RDH5Q92781 318 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 TMEM54Q969K7 222 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 FSCN3Q9NQT6 498 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 SIGLEC8Q9NYZ4 499 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 ZNF257Q9Y2Q1 563 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 U3KQA8 63 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 CACNA1EQ15878 2313 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 SHANK1Q9Y566 2161 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 A0A0G2JRQ6 117 aa6.25□□□□□ -1.41
TRIM49B-202ENST00000622138 hDV102S1A0JD36 115 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms