RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 NAPSAO96009 420 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 EIF4EP06730 217 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 MRPL3P09001 348 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 DNAH10OSP0CZ25 163 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 ANXA8P13928 327 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 AREGP15514 252 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 M6PRP20645 277 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 SERPINA2P20848 420 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 NPPCP23582 126 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 CRHBPP24387 322 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 DUTP33316 252 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 RPL27AP46776 148 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 EIF2B2P49770 351 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 NANOS3P60323 173 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 KRTAP10-8P60410 259 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 RPL11P62913 178 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 HAMPP81172 84 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 MRPL28Q13084 256 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 UNC119Q13432 240 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 YIF1BQ5BJH7 314 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 SIGIRRQ6IA17 410 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 OR2T5Q6IEZ7 315 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 MOB1BQ7L9L4 216 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 SSX6Q7RTT6 188 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 LRRTM1Q86UE6 522 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 GID4Q8IVV7 300 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 PUSL1Q8N0Z8 303 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 FAM24BQ8N5W8 94 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 Q8N814 137 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 HSD17B11Q8NBQ5 300 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 OR51A4Q8NGJ6 313 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 OR13C3Q8NGS6 347 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 OR2T29Q8NH02 315 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 OR10AC1Q8NH08 325 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 DCANP1Q8TF63 244 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 GIPC3Q8TF64 312 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 SCARB1Q8WTV0 552 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 DYDC1Q8WWB3 177 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 IL1F10Q8WWZ1 152 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 TLCD1Q96CP7 247 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 GNPNAT1Q96EK6 184 aaPredicted RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 C16orf45Q96MC5 204 aaPredicted RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 LINC01600Q96MT4 127 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 NEDD4LQ96PU5 975 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 NIPSNAP1Q9BPW8 284 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 GINS3Q9BRX5 216 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 THTPAQ9BU02 230 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 NXF2Q9GZY0 626 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 REEP1Q9H902 201 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 SAR1AQ9NR31 198 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 SDHAF2Q9NX18 166 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 C21orf62Q9NYP8 219 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 TVP23BQ9NYZ1 205 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 GOLT1BQ9Y3E0 138 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 TNFRSF18Q9Y5U5 241 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 S4R3C0 116 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 TRAV5A0A0B4J249 113 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 HELTA6NFD8 242 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 ERICH4A6NGS2 130 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 TMEM212A6NML5 194 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 TRDCB7Z8K6 153 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 PANO1I0J062 215 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 SLC16A6O15403 523 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 ZNF207O43670 478 aaKnown RBP1.58□□□□□ -2.16
CPNE3-211ENST00000621526 ADAP1O75689 374 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 SLC22A5O76082 557 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 KBTBD11O94819 623 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 YIF1AO95070 293 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 CRYZL1O95825 349 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 FAM107AO95990 144 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 HRASP01112 189 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 CD2P06729 351 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 SERPINE2P07093 398 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 HTR1AP08908 422 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 ZNF688P0C7X2 276 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 SAA1P0DJI8 122 aaPredicted RBP1.58□□□□□ -2.16
CPNE3-211ENST00000621526 DEFB130BP0DP73 79 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 DEFB130AP0DP74 79 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 HLA-DRB4P13762 266 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 HSD17B1P14061 328 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 HOXB6P17509 224 aaKnown RBP1.58□□□□□ -2.16
CPNE3-211ENST00000621526 CELP19835 753 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 CRYBB3P26998 211 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 DCKP27707 260 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 BDKRB2P30411 391 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 ATP6V1E1P36543 226 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 ETV6P41212 452 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 NKX2-1P43699 371 aaPredicted RBP1.58□□□□□ -2.16
CPNE3-211ENST00000621526 MFAP4P55083 255 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 SNRPD3P62318 126 aaKnown RBP1.58□□□□□ -2.16
CPNE3-211ENST00000621526 RPL8P62917 257 aaKnown RBP1.58□□□□□ -2.16
CPNE3-211ENST00000621526 ZNF85Q03923 595 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 RCN1Q15293 331 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 THOC7Q6I9Y2 204 aaKnown RBP1.58□□□□□ -2.16
CPNE3-211ENST00000621526 SLC25A24Q6NUK1 477 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 C16orf54Q6UWD8 224 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 TOMM20LQ6UXN7 152 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 IDO2Q6ZQW0 420 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 SCXQ7RTU7 201 aa1.58□□□□□ -2.16
CPNE3-211ENST00000621526 FAM220AQ7Z4H9 259 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms