RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 IGHV3-64DA0A0J9YX35 117 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 C13orf42A0A1B0GVH6 325 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 A0A1B0GW55 424 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 DUXBA0A1W2PPF3 345 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 NKX2-6A6NCS4 301 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 OR5H14A6NHG9 310 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 CRYM-AS1A6NIL9 109 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 ZSCAN5BA6NJL1 495 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 TSC22D2O75157 780 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 ATG12O94817 140 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 OR2A4O95047 310 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 PTBP3O95758 552 aaKnown RBP3.74□□□□□ -1.81
VPS29-212ENST00000621131 IGHV1-46P01743 117 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 CD55P08174 381 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 OR4A8P0C604 315 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 DUX4L2P0CJ85 424 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 DUX4L3P0CJ86 424 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 DUX4L5P0CJ88 424 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 DUX4L6P0CJ89 424 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 DUX4L7P0CJ90 424 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 MUC1P15941 1255 aaPredicted RBP3.74□□□□□ -1.81
VPS29-212ENST00000621131 CXCL3P19876 107 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 AADACP22760 399 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 PRDX2P32119 198 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 NKX2-5P52952 324 aaPredicted RBP3.74□□□□□ -1.81
VPS29-212ENST00000621131 PIGPP57054 158 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 RND3P61587 244 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 CATR1Q13166 79 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 AADACL3Q5VUY0 350 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 THOC7Q6I9Y2 204 aaKnown RBP3.74□□□□□ -1.81
VPS29-212ENST00000621131 Q6P435 159 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 C17orf107Q6ZR85 190 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 WDR86Q86TI4 376 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 LGI3Q8N145 548 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 ZNF561Q8N587 486 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 INO80EQ8NBZ0 244 aaPredicted RBP3.74□□□□□ -1.81
VPS29-212ENST00000621131 RNASE11Q8TAA1 199 aaKnown RBP3.74□□□□□ -1.81
VPS29-212ENST00000621131 RTN4IP1Q8WWV3 396 aaPredicted RBP3.74□□□□□ -1.81
VPS29-212ENST00000621131 IL1F10Q8WWZ1 152 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 RAB39BQ96DA2 213 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 AKR1E2Q96JD6 320 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 WFIKKN1Q96NZ8 548 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 OR2A7Q96R45 310 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 TMEM246Q9BRR3 403 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 NMES1Q9C002 83 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 SLC5A7Q9GZV3 580 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 FXYD6Q9H0Q3 95 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 ZNF665Q9H7R5 613 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 NAA60Q9H7X0 242 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 TMEM165Q9HC07 324 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 DUX4Q9UBX2 424 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 OPN4Q9UHM6 478 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 HSPB11Q9Y547 144 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 MYO7BQ6PIF6 2116 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 RTTNQ86VV8 2226 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 FLNAP21333 2647 aaKnown RBP3.73□□□□□ -1.81
VPS29-212ENST00000621131 IGKV1D-8A0A087WSZ0 117 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 TRGV10A0A0A0MS01 117 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 TRBV6-7A0A0A0MS04 114 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 A0A0D9SG52 128 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 C3orf85A0A1B0GTC6 90 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 KANTRA0A1W2PQU2 76 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 DPRXA6NFQ7 191 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 RFPL4AA6NLU0 287 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 RFPL4AL1F8VTS6 287 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 F8VVB4 439 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 F8VWA3 439 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 PHF1O43189 567 aaPredicted RBP3.73□□□□□ -1.81
VPS29-212ENST00000621131 ADAM20O43506 726 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 RP2O75695 350 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 GOSR1O95249 250 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 IFNA7P01567 189 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 SCTP09683 121 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 HLA-GP17693 338 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 PVALBP20472 110 aaPredicted RBP3.73□□□□□ -1.81
VPS29-212ENST00000621131 GZMHP20718 246 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 NFYAP23511 347 aaPredicted RBP3.73□□□□□ -1.81
VPS29-212ENST00000621131 CD80P33681 288 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 EDDM3BP56851 147 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 S100A10P60903 97 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 RAB14P61106 215 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 EIF5AP63241 154 aaKnown RBP3.73□□□□□ -1.81
VPS29-212ENST00000621131 EDDM3AQ14507 147 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 HMGN3Q15651 99 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 MSMO1Q15800 293 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 IGFBP7Q16270 282 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 ZNF880Q6PDB4 577 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 ZNF826PQ6ZT77 177 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 ZNF767PQ75MW2 155 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 LRP11Q86VZ4 500 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 ZNF695Q8IW36 515 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 H1FOOQ8IZA3 346 aaPredicted RBP3.73□□□□□ -1.81
VPS29-212ENST00000621131 PLPPR1Q8TBJ4 325 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 DCUN1D4Q92564 292 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 GALNT14Q96FL9 552 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 LURAP1Q96LR2 239 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 C2orf50Q96LR7 162 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 RTBDNQ9BSG5 229 aaPredicted RBP3.73□□□□□ -1.81
VPS29-212ENST00000621131 RAB1BQ9H0U4 201 aa3.73□□□□□ -1.81
VPS29-212ENST00000621131 GAL3ST2Q9H3Q3 398 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms