RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 LRTM2Q8N967 370 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 ZNF391Q9UJN7 358 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 ZNF318Q5VUA4 2279 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 K7EQM0 130 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 YPEL1O60688 119 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 RAMP3O60896 148 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 OR2H2O95918 312 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 IL3RAP26951 378 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 PDLIM4P50479 330 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 SRSF6Q13247 344 aaKnown RBP8.98□□□□□ -0.97
CDH1-214ENST00000621016 GABRA6Q16445 453 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 ACTL10Q5JWF8 245 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 RNFT1Q5M7Z0 435 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 OR4B1Q8NGF8 309 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 YPEL2Q96QA6 119 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 GAGE10A6NGK3 116 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 FRMD6-AS1P0C7T7 363 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 CCL11P51671 97 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 PAX9P55771 341 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 TCTAP57738 103 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 UBE2NP61088 152 aaKnown RBP8.98□□□□□ -0.97
CDH1-214ENST00000621016 KRTCAP3Q53RY4 240 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 NMSQ5H8A3 153 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 ZNF787Q6DD87 383 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 ODF3L1Q8IXM7 274 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 C1orf174Q8IYL3 243 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 UBALD2Q8IYN6 164 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 FAM222BQ8WU58 562 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 OR5P3Q8WZ94 311 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 TBL2Q9Y4P3 447 aaKnown RBP8.98□□□□□ -0.97
CDH1-214ENST00000621016 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
CDH1-214ENST00000621016 PITX3O75364 302 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 RAB31Q13636 194 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 Q56UQ5 140 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 ZNF506Q5JVG8 444 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 MRPL52Q86TS9 123 aaKnown RBP8.97□□□□□ -0.97
CDH1-214ENST00000621016 OR5A2Q8NGI9 324 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 OR4S2Q8NH73 311 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 OR1L1Q8NH94 360 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 DCTN5Q9BTE1 182 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 GP6Q9HCN6 339 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 HIF1ANQ9NWT6 349 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 IL36GQ9NZH8 169 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 TACC2O95359 2948 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 TAX1BP3O14907 124 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 SYNGR2O43760 224 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 CRISP2P16562 243 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 ID3Q02535 119 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 SCCPDHQ8NBX0 429 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 C19orf24Q9BVV8 132 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 SLC25A22Q9H936 323 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 TIMM8BQ9Y5J9 83 aaPredicted RBP8.97□□□□□ -0.97
CDH1-214ENST00000621016 GATA2P23769 480 aaPredicted RBP8.97□□□□□ -0.97
CDH1-214ENST00000621016 OR4A5Q8NH83 315 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 SPSB4Q96A44 273 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 WDYHV1Q96HA8 205 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 ABHD14BQ96IU4 210 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 OR2D2Q9H210 308 aa8.97□□□□□ -0.97
CDH1-214ENST00000621016 CLEC18AA5D8T8 446 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 IGKV1-39P01597 117 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 IGKV1D-39P04432 117 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 CD99P14209 185 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 PLP1P60201 277 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 EIF3IQ13347 325 aaKnown RBP8.96□□□□□ -0.97
CDH1-214ENST00000621016 COLCA1Q6ZS62 124 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 Q6ZSR3 168 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 TCTEX1D1Q8N7M0 179 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 CLEC18CQ8NCF0 446 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 GNPNAT1Q96EK6 184 aaPredicted RBP8.96□□□□□ -0.97
CDH1-214ENST00000621016 DUSP13Q9UII6 198 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 TP53TG3Q9ULZ0 132 aa8.96□□□□□ -0.97
CDH1-214ENST00000621016 PPIAL4EA0A075B759 164 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.96□□□□□ -0.98
CDH1-214ENST00000621016 PPIAL4CA0A0B4J2A2 164 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 PPIAL4DF5H284 164 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 HRASP01112 189 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 PPIAL4FP0DN26 164 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 SLC35B1P78383 322 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 ZNF324BQ6AW86 544 aaPredicted RBP8.96□□□□□ -0.98
CDH1-214ENST00000621016 MRGPRGQ86SM5 289 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 SLC25A40Q8TBP6 338 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 GATAD1Q8WUU5 269 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 ZNF479Q96JC4 524 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 OR4C12Q96R67 309 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 TRIB1Q96RU8 372 aa8.96□□□□□ -0.98
CDH1-214ENST00000621016 LOC102723971A0A1B0GUV8 181 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 H0Y8G0 127 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 IGKV1-5P01602 117 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 ESDP10768 282 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 RPL23P62829 140 aaKnown RBP8.95□□□□□ -0.98
CDH1-214ENST00000621016 MEF2CQ06413 473 aaPredicted RBP8.95□□□□□ -0.98
CDH1-214ENST00000621016 WDR86Q86TI4 376 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 INTS1Q8N201 2190 aaKnown RBP8.95□□□□□ -0.98
CDH1-214ENST00000621016 G3V4G9 280 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 H0Y980 276 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 PSPNO60542 156 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 SP1P08047 785 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 COL8A2P25067 703 aa8.95□□□□□ -0.98
CDH1-214ENST00000621016 ID1P41134 155 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms