RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 RPH3ALQ9UNE2 315 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 STRAPQ9Y3F4 350 aaKnown RBP8.15□□□□□ -1.1
VTA1-205ENST00000620996 TRAV3A0A0B4J244 114 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 SMCO3A2RU48 225 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 IFNA10P01566 189 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 SEC11BP0C7V7 166 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 LOXP28300 417 aaPredicted RBP8.15□□□□□ -1.11
VTA1-205ENST00000620996 THBS3P49746 956 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 SLC38A11Q08AI6 406 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 ARL16Q0P5N6 197 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 KHDC3LQ587J8 217 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 UQCC3Q6UW78 93 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 RSG1Q9BU20 258 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 HEYLQ9NQ87 328 aaPredicted RBP8.15□□□□□ -1.11
VTA1-205ENST00000620996 SLC35D1Q9NTN3 355 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 DOCK11Q5JSL3 2073 aa8.15□□□□□ -1.11
VTA1-205ENST00000620996 LOC102724200A0A096LPH7 203 aaPredicted RBP8.14□□□□□ -1.11
VTA1-205ENST00000620996 C7orf77A4D0Y5 90 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 CDX1P47902 265 aaPredicted RBP8.14□□□□□ -1.11
VTA1-205ENST00000620996 ELLP55199 621 aaPredicted RBP8.14□□□□□ -1.11
VTA1-205ENST00000620996 RAB39BQ96DA2 213 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 SAT2Q96F10 170 aaPredicted RBP8.14□□□□□ -1.11
VTA1-205ENST00000620996 SMIM8Q96KF7 97 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 SEC11CQ9BY50 192 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 HSPB7Q9UBY9 170 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 CARHSP1Q9Y2V2 147 aaKnown RBP8.14□□□□□ -1.11
VTA1-205ENST00000620996 C9JQL5 133 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 COX7A1P24310 79 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 KIR2DS2P43631 304 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 TFF3Q07654 80 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 PJVKQ0ZLH3 352 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 RTL8BQ17RB0 113 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 ARSJQ5FYB0 599 aaPredicted RBP8.14□□□□□ -1.11
VTA1-205ENST00000620996 CORO2AQ92828 525 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 MRPL20Q9BYC9 149 aaKnown RBP8.14□□□□□ -1.11
VTA1-205ENST00000620996 EIF5A2Q9GZV4 153 aaKnown RBP8.14□□□□□ -1.11
VTA1-205ENST00000620996 NCOR1P1Q9H4R4 102 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 ONECUT1Q9UBC0 465 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 FOLR2P14207 255 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 HOXA5P20719 270 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 HEPN1Q6WQI6 88 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 TIMD4Q96H15 378 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 OR4C12Q96R67 309 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 CACFD1Q9UGQ2 172 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 AKAP6Q13023 2319 aa8.14□□□□□ -1.11
VTA1-205ENST00000620996 FAM90A26D6RGX4 464 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 PPP1R2P9O14990 202 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 ENSAO43768 121 aaKnown RBP8.13□□□□□ -1.11
VTA1-205ENST00000620996 RPL29P47914 159 aaKnown RBP8.13□□□□□ -1.11
VTA1-205ENST00000620996 SLC25A48Q6ZT89 311 aaKnown RBP8.13□□□□□ -1.11
VTA1-205ENST00000620996 ZNF439Q8NDP4 499 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 ITLN2Q8WWU7 325 aaPredicted RBP8.13□□□□□ -1.11
VTA1-205ENST00000620996 ENY2Q9NPA8 101 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 PARP11Q9NR21 331 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 TANC2Q9HCD6 1990 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 APOA2P02652 100 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 DANCRP0C864 163 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 MYOD1P15172 320 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 OR8B3Q8NGG8 313 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 OR13D1Q8NGV5 346 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 GNPNAT1Q96EK6 184 aaPredicted RBP8.13□□□□□ -1.11
VTA1-205ENST00000620996 OR8B2Q96RD0 313 aa8.13□□□□□ -1.11
VTA1-205ENST00000620996 IGHV3-72A0A0B4J1Y9 119 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 TMEM8BA6NDV4 472 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 RNASEK-C17orf49H0YIS7 233 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 C19orf84I3L1E1 186 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 TGOLN2O43493 480 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 IGKV1-16P04430 117 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 PPOXP50336 477 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 DIAPH2-AS1Q14236 149 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 OR4A47Q6IF82 309 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 IL34Q6ZMJ4 242 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 HAPLN4Q86UW8 402 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 ABHD12Q8N2K0 398 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 ZNF664Q8N3J9 261 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 OR10P1Q8NGE3 313 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 C22orf15Q8WYQ4 148 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 ADTRPQ96IZ2 230 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 CIB3Q96Q77 187 aaPredicted RBP8.12□□□□□ -1.11
VTA1-205ENST00000620996 ARV1Q9H2C2 271 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 HIPK2Q9H2X6 1198 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 P0C879 139 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 CT45A6P0DMU7 189 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 CT45A5P0DMU8 189 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 CT45A7P0DMV0 189 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
VTA1-205ENST00000620996 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.12□□□□□ -1.11
VTA1-205ENST00000620996 RAB1CQ92928 201 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 NDUFAF3Q9BU61 184 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 A8MWP6 167 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 HRASP01112 189 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 TFPI2P48307 235 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 ZNF525Q8N782 197 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 HARBI1Q96MB7 349 aa8.12□□□□□ -1.11
VTA1-205ENST00000620996 PPIAL4CA0A0B4J2A2 164 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 J3QR06 171 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 ITGB1BP1O14713 200 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 NDUFS7O75251 213 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 PPIAL4GP0DN37 164 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 FGF7P21781 194 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms