RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TRAT1Q6PIZ9 186 aa16.17■□□□□ 0.18
PDLIM3-212ENST00000620787 TCF19Q9Y242 345 aa16.17■□□□□ 0.18
PDLIM3-212ENST00000620787 KLRC4-KLRK1H3BQV0 150 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 BRS3P32247 399 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 ERVK-16P61578 105 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 GAGE1Q13065 139 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 EDDM3AQ14507 147 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 MORN2Q502X0 79 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 RPL39P5Q59GN2 51 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 FAM90A1Q86YD7 464 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 SAMD10Q9BYL1 202 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 TMEM140Q9NV12 185 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 OR5I1Q13606 314 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 UHRF2Q96PU4 802 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 FBXL7Q9UJT9 491 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 GOLT1BQ9Y3E0 138 aa16.16■□□□□ 0.18
PDLIM3-212ENST00000620787 TRGV8A0A0C4DH27 118 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 NPSP0C0P6 89 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 TNFSF10P50591 281 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 ST6GALNAC3Q8NDV1 305 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 GNB1LQ9BYB4 327 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 OPN3Q9H1Y3 402 aaPredicted RBP16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 LPAR2Q9HBW0 351 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 GNG12Q9UBI6 72 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 TRBV9A0A0B4J1U6 114 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 MT-CO2P00403 227 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 AREGP15514 252 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 RNFT1Q5M7Z0 435 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 INO80CQ6PI98 192 aaPredicted RBP16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 TEPPQ6URK8 271 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 OR8I2Q8N0Y5 310 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 Q8N976 141 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 SFXN3Q9BWM7 321 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 GNB4Q9HAV0 340 aa16.15■□□□□ 0.18
PDLIM3-212ENST00000620787 CGAP01215 116 aa16.14■□□□□ 0.17
PDLIM3-212ENST00000620787 OR4P4Q8NGL7 312 aa16.14■□□□□ 0.17
PDLIM3-212ENST00000620787 MSL2Q9HCI7 577 aa16.14■□□□□ 0.17
PDLIM3-212ENST00000620787 JPT1Q9UK76 154 aa16.14■□□□□ 0.17
PDLIM3-212ENST00000620787 TRGV5A0A0B4J1U4 118 aa16.14■□□□□ 0.17
PDLIM3-212ENST00000620787 FZR1Q9UM11 496 aa16.14■□□□□ 0.17
PDLIM3-212ENST00000620787 A0A1W2PNU3 283 aaPredicted RBP16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 TIMM8AO60220 97 aaPredicted RBP16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 GPX1P07203 203 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 ZNF134P52741 427 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 IFI27L2Q9H2X8 130 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 PPP1R14DQ9NXH3 145 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 AGFG2O95081 481 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 PRDX2P32119 198 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 CENPWQ5EE01 88 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 SIGLECL1Q8N7X8 197 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 S1PR3Q99500 378 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 PRR14LQ5THK1 2151 aa16.13■□□□□ 0.17
PDLIM3-212ENST00000620787 C15orf61A6NNL5 157 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 IGHV3-13P01766 116 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 IGHV3-7P01780 117 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 OR10J4P0C629 311 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 ARG2P78540 354 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 PRR20EP86478 221 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 PRR20CP86479 221 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 PRR20DP86480 221 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 PRR20BP86481 221 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 PRR20AP86496 221 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 C1orf229Q6ZS94 237 aaPredicted RBP16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 MIR17HGQ75NE6 70 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 GCNT2Q8N0V5 402 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 LRRC29Q8WV35 223 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 DDB2Q92466 427 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 C21orf140B9A014 251 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 CRYABP02511 175 aaKnown RBP16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 IGFBP2P18065 325 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 NPY1RP25929 384 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 LOXL3P58215 753 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 SLC24A4Q8NFF2 622 aa16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 RBM14Q96PK6 669 aaKnown RBP16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 FAM103A1Q9BTL3 118 aaKnown RBP16.12■□□□□ 0.17
PDLIM3-212ENST00000620787 LINC00869P0C866 280 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 GNG4P50150 75 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 CX3CL1P78423 397 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 OR4B1Q8NGF8 309 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 FAM216AQ8WUB2 273 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 ARL2-SNX15V9GYD0 113 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 IGKV3-15P01624 115 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 KRTDAPP60985 99 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 BATFQ16520 125 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 TMEM136Q6ZRR5 245 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 ZNF586Q9NXT0 402 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 NAT8BQ9UHF3 227 aa16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 TBL2Q9Y4P3 447 aaKnown RBP16.11■□□□□ 0.17
PDLIM3-212ENST00000620787 IGKV1D-17A0A075B6S4 117 aa16.1■□□□□ 0.17
PDLIM3-212ENST00000620787 SAA2-SAA4A0A096LPE2 208 aa16.1■□□□□ 0.17
PDLIM3-212ENST00000620787 CA2P00918 260 aa16.1■□□□□ 0.17
PDLIM3-212ENST00000620787 CTRLP40313 264 aa16.1■□□□□ 0.17
PDLIM3-212ENST00000620787 KIR2DS2P43631 304 aa16.1■□□□□ 0.17
PDLIM3-212ENST00000620787 RAB31Q13636 194 aa16.1■□□□□ 0.17
PDLIM3-212ENST00000620787 DOLPP1Q86YN1 238 aa16.1■□□□□ 0.17
PDLIM3-212ENST00000620787 SLC25A10Q9UBX3 287 aaPredicted RBP16.1■□□□□ 0.17
PDLIM3-212ENST00000620787 HELTA6NFD8 242 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 DIRC3C9JPN6 131 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 SPINK4O60575 86 aa16.09■□□□□ 0.17
PDLIM3-212ENST00000620787 ACTL6BO94805 426 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms