RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 AKAP14Q86UN6 197 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 ZNF429Q86V71 674 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 PPP1R27Q86WC6 154 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 FOXRED2Q8IWF2 684 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 MMD2Q8IY49 270 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 SIGLECL1Q8N7X8 197 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 Q8N9W7 124 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 OR52E5Q8NH55 327 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 OR1S1Q8NH92 325 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 SSMEM1Q8WWF3 244 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 QTRT1Q9BXR0 403 aaKnown RBP6.39□□□□□ -1.39
CPNE3-209ENST00000620393 FBXL15Q9H469 300 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 ZNF430Q9H8G1 570 aaPredicted RBP6.39□□□□□ -1.39
CPNE3-209ENST00000620393 RANGRFQ9HD47 186 aaPredicted RBP6.39□□□□□ -1.39
CPNE3-209ENST00000620393 ZFP57Q9NU63 452 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 TMEM14BQ9NUH8 114 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 FOXA2Q9Y261 457 aaPredicted RBP6.39□□□□□ -1.39
CPNE3-209ENST00000620393 ANK3Q12955 4377 aaKnown RBP6.38□□□□□ -1.39
CPNE3-209ENST00000620393 TEX50A0A1B0GTY4 177 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 BTBD17A6NE02 478 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 C15orf61A6NNL5 157 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 ST8SIA3O43173 380 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 FGF16O43320 207 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 RBMXL2O75526 392 aaKnown RBP6.38□□□□□ -1.39
CPNE3-209ENST00000620393 MBPP02686 304 aaPredicted RBP6.38□□□□□ -1.39
CPNE3-209ENST00000620393 SRD5A1P18405 259 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 SPCS3P61009 180 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 TNFRSF9Q07011 255 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 PJVKQ0ZLH3 352 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 PLGLAQ15195 96 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 PDLIM3Q53GG5 364 aaPredicted RBP6.38□□□□□ -1.39
CPNE3-209ENST00000620393 Q5BKY6 102 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 ZNF562Q6V9R5 426 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 RBMS3Q6XE24 437 aaKnown RBP6.38□□□□□ -1.39
CPNE3-209ENST00000620393 Q71RC1 249 aaPredicted RBP6.38□□□□□ -1.39
CPNE3-209ENST00000620393 TMEM219Q86XT9 240 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 TCTE3Q8IZS6 198 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 FAM71E2Q8N5Q1 922 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 TMEM86BQ8N661 226 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 OR1L8Q8NGR8 309 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 OR2T35Q8NGX2 323 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 PPP1R1CQ8WVI7 109 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 CLCC1Q96S66 551 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 RASL11BQ9BPW5 248 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 SLC25A33Q9BSK2 321 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 RNF126Q9BV68 326 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 COMMD5Q9GZQ3 224 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 TPSG1Q9NRR2 321 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 HSPB7Q9UBY9 170 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 ZNF257Q9Y2Q1 563 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 OR51B2Q9Y5P1 312 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 POMT1Q9Y6A1 747 aa6.38□□□□□ -1.39
CPNE3-209ENST00000620393 HIVEP2P31629 2446 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 NAV3Q8IVL0 2385 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 INAFM1C9JVW0 142 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 H0YIZ8 118 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 K7EPK0 472 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 M0QZK8 103 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 HOXA3O43365 443 aaPredicted RBP6.37□□□□□ -1.39
CPNE3-209ENST00000620393 CHST1O43916 411 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 MED6O75586 246 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 ACTL6BO94805 426 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 MPC2O95563 127 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 IFNA17P01571 189 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 RLN2P04090 185 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 AMY1AP04745 511 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 MYOD1P15172 320 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 OR2B8PP59922 312 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 POLR2GP62487 172 aaKnown RBP eCLIP6.37□□□□□ -1.39
CPNE3-209ENST00000620393 CX3CL1P78423 397 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 CD300CQ08708 224 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 FGL1Q08830 312 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 RAB32Q13637 225 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 C5orf56Q8N8D9 126 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 OR5B3Q8NH48 314 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 MAGT1Q9H0U3 335 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 NDUFA4L2Q9NRX3 87 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 VPREB3Q9UKI3 123 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 MOB4Q9Y3A3 225 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 TLN2Q9Y4G6 2542 aa6.37□□□□□ -1.39
CPNE3-209ENST00000620393 TRAV14DV4A0A0A6YYC5 116 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 E7EUB6 86 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 G3V3Q6 166 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 SMLR1H3BR10 107 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 CLDN34H7C241 214 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 SYNGR2O43760 224 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 CRLF1O75462 422 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 CNIH1O95406 144 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 LY86O95711 162 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 SCGB1D2O95969 90 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 CA2P00918 260 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 HLA-DRB1P01911 266 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 OPN1MWP04001 364 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 OPN1MW2P0DN77 364 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 OPN1MW3P0DN78 364 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 SLC25A4P12235 298 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 LYL1P12980 280 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 RPL27AP46776 148 aaKnown RBP6.36□□□□□ -1.39
CPNE3-209ENST00000620393 COMPP49747 757 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms