RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 J3QW42 95 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 RUNX1Q01196 453 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 AQP3Q92482 292 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 RECKO95980 971 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 IGHMP01871 453 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 AGAP20933 346 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 RSPO4Q2I0M5 234 aaPredicted RBP9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 MIXL1Q9H2W2 232 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 PAX1P15863 534 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 MUC1P15941 1255 aaPredicted RBP9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 GLRXP35754 106 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 SELENOHQ8IZQ5 122 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 TMEM74BQ9NUR3 256 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 RIF1Q5UIP0 2472 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 RBMY1BA6NDE4 496 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 RBMY1EA6NEQ0 496 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 RBMY1DP0C7P1 496 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 RBMY1A1P0DJD3 496 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 RBMY1CP0DJD4 496 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 HBBP68871 147 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 RTN4RL2Q86UN3 420 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 LRTM2Q8N967 370 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 G6PC2Q9NQR9 355 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 ASIPP42127 132 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 MRPL16Q9NX20 251 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 TMEM170BQ5T4T1 132 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 SLC25A34Q6PIV7 304 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 C9JCJ5 164 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 ERGP11308 486 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 MYOD1P15172 320 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 LHFPL6Q9Y693 200 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 TMEM91Q6ZNR0 172 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 MTURNQ8N3F0 131 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 ZPLD1Q8TCW7 415 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 LEAP2Q969E1 77 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 SMIM8Q96KF7 97 aa9.54□□□□□ -0.88
CCDC144B-208ENST00000618081 CD160O95971 181 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 CNTFRP26992 372 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 LCN2P80188 198 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 PCOLCEQ15113 449 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 CFAP161Q6P656 301 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 ZNF418Q8TF45 676 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 NUDT11Q96G61 164 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 OR5AC2Q9NZP5 309 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 SEMA5BQ9P283 1151 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 F11RQ9Y624 299 aaKnown RBP9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 TCF21O43680 179 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 IRF3Q14653 427 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 ACSF3Q4G176 576 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 CDCP2Q5VXM1 449 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 ADAMTS7Q9UKP4 1686 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 IGHV3OR16-10A0A075B7F0 116 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 IGKV1-8A0A0C4DH67 115 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 TCF23Q7RTU1 214 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 DTX2Q86UW9 622 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 TMEM252Q8N6L7 170 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 LINC00469Q8N7U9 141 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 FAM181AQ8N9Y4 354 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 HIST1H2BAQ96A08 127 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 BEX4Q9NWD9 120 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 LIMS1P48059 325 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 C1orf162Q8NEQ5 155 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 FDCSPQ8NFU4 85 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 TNS1Q9HBL0 1735 aaKnown RBP9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 VGLL1Q99990 258 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 AICDAQ9GZX7 198 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 ZNF688P0C7X2 276 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 CEACAM1P13688 526 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 VDAC2P45880 294 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 BSPH1Q075Z2 132 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 OR1P1Q8NH06 330 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 NLRC5Q86WI3 1866 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 C10orf126Q8N4M7 172 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 TMEM160Q9NX00 188 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 PILRAQ9UKJ1 303 aa9.53□□□□□ -0.88
CCDC144B-208ENST00000618081 NBASA2RRP1 2371 aa9.52□□□□□ -0.88
CCDC144B-208ENST00000618081 ARPC1AQ92747 370 aa9.52□□□□□ -0.88
CCDC144B-208ENST00000618081 ZNF414Q96IQ9 312 aa9.52□□□□□ -0.88
CCDC144B-208ENST00000618081 CFHR5Q9BXR6 569 aa9.52□□□□□ -0.88
CCDC144B-208ENST00000618081 SRXN1Q9BYN0 137 aa9.52□□□□□ -0.88
CCDC144B-208ENST00000618081 HS3ST3B1Q9Y662 390 aa9.52□□□□□ -0.88
CCDC144B-208ENST00000618081 TRGV2A0A075B6R0 118 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 SMIM13P0DJ93 91 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 TDGF1P13385 188 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 GPX4P36969 197 aaPredicted RBP9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 FMC1Q96HJ9 113 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 NPFFR1Q9GZQ6 430 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 KIF26AQ9ULI4 1882 aaPredicted RBP9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 STHQ8IWL8 128 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 ZIC4Q8N9L1 334 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 TCF19Q9Y242 345 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 NPIPB13A6NJU9 1138 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 NPIPB4C9JG80 1138 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 HKR1P10072 659 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 LINC01587Q99440 93 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 FAM206AQ9NX38 181 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 IGKV1D-33P01593 117 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 IGKV1-33P01594 117 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 FAM209BQ5JX69 171 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 WDR82Q6UXN9 313 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms