RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PLAUP00749 431 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 HABP2Q14520 560 aaPredicted RBP10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 PDPNQ86YL7 162 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 CLDND2Q8NHS1 167 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 HSPB7Q9UBY9 170 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 TGIF2-C20orf24A0A0A6YYL0 155 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 FCN1O00602 326 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 TNFSF13O75888 250 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 CD5P06127 495 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 OR9G9P0C7N8 305 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 RPL11P62913 178 aaKnown RBP10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 BATFQ16520 125 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 Q6ZR03 302 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 OR2T6Q8NHC8 308 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 COA4Q9NYJ1 87 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 LINC00312Q9Y6C7 94 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 MMD2Q8IY49 270 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 FGF23Q9GZV9 251 aaPredicted RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 VSIRQ9H7M9 311 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 METTL1Q9UBP6 276 aaKnown RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 FUT9Q9Y231 359 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 IGKV1D-17A0A075B6S4 117 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 LOC105371267A0A1B0GV96 52 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 SEC14L6B5MCN3 397 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 RND2P52198 227 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 WDR25Q64LD2 544 aaPredicted RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 MBNL3Q9NUK0 354 aaKnown RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 DOCK11Q5JSL3 2073 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 BPTFQ12830 3046 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 A0A0G2JNJ9 132 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 DLL1O00548 723 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 PRB3Q04118 309 aaPredicted RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 TBR1Q16650 682 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 FAM53AQ6NSI3 398 aaPredicted RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 STPG3Q8N7X2 389 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 OR4F17Q8NGA8 305 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 FAM103A1Q9BTL3 118 aaKnown RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 MRPL20Q9BYC9 149 aaKnown RBP10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 Q9UFV3 132 aa10.97□□□□□ -0.65
PPP4R3B-206ENST00000616407 ZNF98A6NK75 572 aa10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 KIAA1324LA8MWY0 1029 aaPredicted RBP10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 LYNX1G3V0Z9 82 aa10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 LYNX1P0DP58 116 aa10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 RANP62826 216 aaKnown RBP10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 Q6ZSR3 168 aa10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 CHRDL1Q9BU40 450 aa10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 THYN1Q9P016 225 aa10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 CHD9Q3L8U1 2897 aa10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 GATCO43716 136 aaKnown RBP10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 FAM3BP58499 235 aaPredicted RBP10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 MEF2CQ06413 473 aaPredicted RBP10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 RASL11BQ9BPW5 248 aa10.96□□□□□ -0.65
PPP4R3B-206ENST00000616407 LINC00473A8K010 186 aa10.96□□□□□ -0.66
PPP4R3B-206ENST00000616407 GNG7O60262 68 aa10.96□□□□□ -0.66
PPP4R3B-206ENST00000616407 CTRB1P17538 263 aa10.96□□□□□ -0.66
PPP4R3B-206ENST00000616407 ZNF585BQ52M93 769 aa10.96□□□□□ -0.66
PPP4R3B-206ENST00000616407 CTRB2Q6GPI1 263 aa10.96□□□□□ -0.66
PPP4R3B-206ENST00000616407 OSR1Q8TAX0 266 aaPredicted RBP10.96□□□□□ -0.66
PPP4R3B-206ENST00000616407 NABP2Q9BQ15 211 aa10.96□□□□□ -0.66
PPP4R3B-206ENST00000616407 CEP192Q8TEP8 1941 aa10.96□□□□□ -0.66
PPP4R3B-206ENST00000616407 CHEK1O14757 476 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 ACAA1P09110 424 aaPredicted RBP10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 ICAM4Q14773 271 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 ZNF439Q8NDP4 499 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 NPIPB3Q92617 1050 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 RNASE6Q93091 150 aaKnown RBP10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 ERVK11-1P61568 191 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 PAX5Q02548 391 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 RPEL1Q2QD12 228 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 PNKDQ8N490 385 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 PAXXQ9BUH6 204 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 EML6Q6ZMW3 1958 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 LRP4O75096 1905 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 NPIPB11E5RHQ5 1161 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 IL6RP08887 468 aaPredicted RBP10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 SFTPCP11686 197 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 OR5AU1Q8NGC0 362 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 PERPQ96FX8 193 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 WFIKKN1Q96NZ8 548 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 TMUB1Q9BVT8 246 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 CLEC7AQ9BXN2 247 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 IFT22Q9H7X7 185 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 TMEM250H0YL14 139 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 TMEM50AO95807 157 aa10.95□□□□□ -0.66
PPP4R3B-206ENST00000616407 RBFOX2O43251 390 aaKnown RBP eCLIP10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 IGFBP2P18065 325 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 MST1LQ2TV78 715 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 PQLC2Q6ZP29 291 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 SIGLECL1Q8N7X8 197 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 HTR1DP28221 377 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 PMS2P11Q13670 270 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 KRTAP27-1Q3LI81 207 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 Q8NFD4 153 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 TXNDC17Q9BRA2 123 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 AAMDCQ9H7C9 122 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 BRS3P32247 399 aa10.94□□□□□ -0.66
PPP4R3B-206ENST00000616407 IL15RAQ13261 267 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms