RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 GPR183P32249 361 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 CX3CL1P78423 397 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 SLC25A53Q5H9E4 307 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 KLF14Q8TD94 323 aaPredicted RBP15.98■□□□□ 0.15
SPAST-203ENST00000615843 NEUROG1Q92886 237 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 JKAMPQ9P055 326 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 TRAV9-2A0A087WT02 112 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 TRBV6-7A0A0A0MS04 114 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 Q5PR19 223 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 AMMECR1LQ6DCA0 310 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 PRELID3AQ96N28 172 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 UNC13CQ8NB66 2214 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 LDLRAD2Q5SZI1 272 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 C12orf77C9JDV5 145 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 DLEU1O43261 78 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 MRPL16Q9NX20 251 aaKnown RBP15.97■□□□□ 0.15
SPAST-203ENST00000615843 SOX21Q9Y651 276 aaPredicted RBP15.97■□□□□ 0.15
SPAST-203ENST00000615843 CGB1A6NKQ9 187 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 ZNF831Q5JPB2 1677 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 SYNGR3O43761 229 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 MOSP00540 346 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 RPL39P5Q59GN2 51 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 CABIN1Q9Y6J0 2220 aa15.97■□□□□ 0.15
SPAST-203ENST00000615843 TNFSF13O75888 250 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 WFDC3Q8IUB2 231 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 C16orf92Q96LL3 132 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 ANKRD36A6QL64 1941 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 TGFBR3LH3BV60 316 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 CEACAM1P13688 526 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 OR10J6PQ8NGY7 276 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 DUSP15Q9H1R2 295 aaPredicted RBP15.96■□□□□ 0.15
SPAST-203ENST00000615843 OR4C13Q8NGP0 309 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 WBP1LQ9NX94 342 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 RAXQ9Y2V3 346 aa15.96■□□□□ 0.15
SPAST-203ENST00000615843 CA1P00915 261 aaPredicted RBP15.96■□□□□ 0.14
SPAST-203ENST00000615843 RPP21Q9H633 154 aaKnown RBP15.96■□□□□ 0.14
SPAST-203ENST00000615843 TRBV20OR9-2A0A075B6H5 130 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 NBEAP1P0C6P0 100 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 ID1P41134 155 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 C5orf30Q96GV9 206 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 A0A1B0GUT8 65 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 ID3Q02535 119 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 FAM53AQ6NSI3 398 aaPredicted RBP15.95■□□□□ 0.14
SPAST-203ENST00000615843 MIR17HGQ75NE6 70 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 RNASE7Q9H1E1 156 aaKnown RBP15.95■□□□□ 0.14
SPAST-203ENST00000615843 IFI27L2Q9H2X8 130 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 HILPDAQ9Y5L2 63 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 RELQ04864 619 aaPredicted RBP15.95■□□□□ 0.14
SPAST-203ENST00000615843 FAM89BQ8N5H3 189 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 BEND2Q8NDZ0 799 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 ZNF418Q8TF45 676 aaPredicted RBP15.95■□□□□ 0.14
SPAST-203ENST00000615843 MBD3L1Q8WWY6 194 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 MEGF9Q9H1U4 602 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 PHLDA3Q9Y5J5 127 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 NAPSAO96009 420 aa15.95■□□□□ 0.14
SPAST-203ENST00000615843 ZNF236Q9UL36 1845 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 A0A1W2PRS3 328 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 C16orf97H3BN30 126 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 C2orf88Q9BSF0 95 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 HS3ST3B1Q9Y662 390 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 RGPD3A6NKT7 1758 aaPredicted RBP15.94■□□□□ 0.14
SPAST-203ENST00000615843 RGPD4Q7Z3J3 1758 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 IGKV1D-13A0A0B4J2D9 117 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 IGKV1-13P0DP09 117 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 MFAP4P55083 255 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 C1orf194Q5T5A4 169 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 DIRC2Q96SL1 478 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 A0A1B0GW64 132 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 DLX6P56179 175 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 FAM131CQ96AQ9 280 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 A0A0A6YYD4 124 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 IGKV1-9A0A0C4DH69 117 aa15.94■□□□□ 0.14
SPAST-203ENST00000615843 SP7Q8TDD2 431 aaPredicted RBP15.94■□□□□ 0.14
SPAST-203ENST00000615843 TRAV30A0A087WSZ9 112 aa15.93■□□□□ 0.14
SPAST-203ENST00000615843 HIGD1CA8MV81 97 aa15.93■□□□□ 0.14
SPAST-203ENST00000615843 SCN2AQ99250 2005 aa15.93■□□□□ 0.14
SPAST-203ENST00000615843 PEAR1Q5VY43 1037 aaPredicted RBP15.93■□□□□ 0.14
SPAST-203ENST00000615843 FNDC4Q9H6D8 234 aaPredicted RBP15.93■□□□□ 0.14
SPAST-203ENST00000615843 BEX4Q9NWD9 120 aaPredicted RBP15.93■□□□□ 0.14
SPAST-203ENST00000615843 COL5A3P25940 1745 aaPredicted RBP15.93■□□□□ 0.14
SPAST-203ENST00000615843 PGPEP1LA6NFU8 196 aa15.93■□□□□ 0.14
SPAST-203ENST00000615843 METTL26Q96S19 204 aa15.93■□□□□ 0.14
SPAST-203ENST00000615843 COL11A1P12107 1806 aaPredicted RBP15.93■□□□□ 0.14
SPAST-203ENST00000615843 MST1P26927 711 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 IGKV1D-8A0A087WSZ0 117 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 WNT9BO14905 357 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 TSPAN7P41732 249 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 ADCYAP1P18509 176 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 TMEM30BQ3MIR4 351 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 OR10J3Q5JRS4 329 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 PSMG4Q5JS54 123 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 DEFB124Q8NES8 71 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 CRISPLD2Q9H0B8 497 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 VSIRQ9H7M9 311 aa15.92■□□□□ 0.14
SPAST-203ENST00000615843 SUPT4H1P63272 117 aaKnown RBP15.91■□□□□ 0.14
SPAST-203ENST00000615843 ARID2Q68CP9 1835 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 LINC00614P0C842 121 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 RIPPLY3P57055 190 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 LOXL3P58215 753 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 OCC1Q8TAD7 63 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms