RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ZNF737O75373 536 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 CRISP2P16562 243 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 ADMP35318 185 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 NPBWR2P48146 333 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 ZNF83P51522 516 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 OR4A47Q6IF82 309 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 LCN15Q6UWW0 184 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 Q8N976 141 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 SPSB4Q96A44 273 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 C1QTNF5Q9BXJ0 243 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 PARLQ9H300 379 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 FLNCQ14315 2725 aa10.91□□□□□ -0.66
FOXN3-219ENST00000615335 A0A1B0GV72 72 aa10.91□□□□□ -0.66
FOXN3-219ENST00000615335 SERF1AO75920 110 aa10.91□□□□□ -0.66
FOXN3-219ENST00000615335 GYPAP02724 150 aa10.91□□□□□ -0.66
FOXN3-219ENST00000615335 FAM78BQ5VT40 261 aa10.91□□□□□ -0.66
FOXN3-219ENST00000615335 FAM71F2Q6NXP2 309 aa10.91□□□□□ -0.66
FOXN3-219ENST00000615335 RNASE6Q93091 150 aaKnown RBP10.91□□□□□ -0.66
FOXN3-219ENST00000615335 PSMG3Q9BT73 122 aaPredicted RBP10.91□□□□□ -0.66
FOXN3-219ENST00000615335 TMEM222Q9H0R3 208 aa10.91□□□□□ -0.66
FOXN3-219ENST00000615335 SMPXQ9UHP9 88 aa10.91□□□□□ -0.66
FOXN3-219ENST00000615335 UBE2J1Q9Y385 318 aaPredicted RBP10.91□□□□□ -0.66
FOXN3-219ENST00000615335 J3QR06 171 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 M0R1B8 84 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 KRTDAPP60985 99 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 Q0VG73 95 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 DAZAP2Q15038 168 aaPredicted RBP10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FBXL19-AS1Q494R0 122 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 ZNF695Q8IW36 515 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 RPRMQ9NS64 109 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FBXL7Q9UJT9 491 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 CADP27708 2225 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 IGHV1-18A0A0C4DH31 117 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A10PA6NDY2 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A18PA6NE21 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A16PA6NEW6 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A20PA6NIJ5 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A8PA6NJQ4 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A7PA6NKC0 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A22PA8MWA6 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A12PA8MX19 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A5PA8MXJ8 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A23PA8MXZ1 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 J3QW42 95 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 ZNF253O75346 499 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 KRASP01116 189 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A15PP0C7V4 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A13PP0C7W8 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A14PP0C7W9 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A24PP0C7X0 464 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 CECR9P0C854 216 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 PSMB3P49720 205 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 PSG3Q16557 428 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 SPIN3Q5JUX0 258 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FFAR4Q5NUL3 377 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 TBC1D26Q86UD7 250 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 MUC15Q8N387 334 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 FAM169BQ8N8A8 192 aa10.9□□□□□ -0.66
FOXN3-219ENST00000615335 NGFP01138 241 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 IGLV1-44P01699 117 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 REG1AP05451 166 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 BCL3P20749 454 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 GRNP28799 593 aaKnown RBP10.89□□□□□ -0.67
FOXN3-219ENST00000615335 RIPPLY3P57055 190 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 LINC00310P59036 64 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 SERF2P84101 59 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 SCGB2A2Q13296 93 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 Q6ZS49 121 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 BAGE3Q86Y29 109 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 BAGE2Q86Y30 109 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 WFDC8Q8IUA0 241 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 SAXO1Q8IYX7 474 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 APOBEC3DQ96AK3 386 aaPredicted RBP10.89□□□□□ -0.67
FOXN3-219ENST00000615335 TRAV34A0A0B4J273 112 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 GAGE12BA1L429 117 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 CDIPTO14735 213 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 SSSCA1O60232 199 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 CLDN14O95500 239 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 PAX2Q02962 417 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 SAMD13Q5VXD3 122 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 WDR73Q6P4I2 378 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 COLCA1Q6ZS62 124 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 SCGB1C1Q8TD33 95 aa10.89□□□□□ -0.67
FOXN3-219ENST00000615335 TRAV9-1A0A075B6T8 112 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 GRIFINA4D1Z8 144 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 CST7O76096 145 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 GPX1P07203 203 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 PMCHL1Q16048 86 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 SRSF7Q16629 238 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■■■□ 20.1
FOXN3-219ENST00000615335 Q5PR19 223 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 SELENOHQ8IZQ5 122 aaKnown RBP10.88□□□□□ -0.67
FOXN3-219ENST00000615335 ITLN2Q8WWU7 325 aaPredicted RBP10.88□□□□□ -0.67
FOXN3-219ENST00000615335 ANKHD1Q8IWZ3 2542 aaKnown RBP10.88□□□□□ -0.67
FOXN3-219ENST00000615335 OR7C2O60412 319 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 SCTP09683 121 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 MDH2P40926 338 aaKnown RBP10.88□□□□□ -0.67
FOXN3-219ENST00000615335 FGF12P61328 243 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 ZNF726P1Q15940 193 aa10.88□□□□□ -0.67
FOXN3-219ENST00000615335 ZNF808Q8N4W9 903 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms