RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 RAB9BQ9NP90 201 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 UQCRFS1P47985 274 aa15.64■□□□□ 0.09
MMP28-204ENST00000615136 SPCS3P61009 180 aa15.64■□□□□ 0.09
MMP28-204ENST00000615136 FFAR4Q5NUL3 377 aa15.64■□□□□ 0.09
MMP28-204ENST00000615136 SLC25A48Q6ZT89 311 aaKnown RBP15.64■□□□□ 0.09
MMP28-204ENST00000615136 OR10G9Q8NGN4 311 aa15.64■□□□□ 0.09
MMP28-204ENST00000615136 OR10G7Q8NGN6 311 aa15.64■□□□□ 0.09
MMP28-204ENST00000615136 SDF2L1Q9HCN8 221 aa15.64■□□□□ 0.09
MMP28-204ENST00000615136 TMEM242Q9NWH2 141 aa15.64■□□□□ 0.09
MMP28-204ENST00000615136 TET2Q6N021 2002 aaPredicted RBP15.64■□□□□ 0.09
MMP28-204ENST00000615136 TMEM8BA6NDV4 472 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 NDUFB3O43676 98 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 NDUFS6O75380 124 aaKnown RBP15.63■□□□□ 0.09
MMP28-204ENST00000615136 MEF2CQ06413 473 aaPredicted RBP15.63■□□□□ 0.09
MMP28-204ENST00000615136 ZNF343Q6P1L6 599 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 Q8N7P7 452 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 ZNF714Q96N38 554 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 RALYQ9UKM9 306 aaKnown RBP15.63■□□□□ 0.09
MMP28-204ENST00000615136 SPTBN1Q01082 2364 aaKnown RBP15.63■□□□□ 0.09
MMP28-204ENST00000615136 LY6HO94772 140 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 CD81P60033 236 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 ERVK-16P61578 105 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 MEF2BQ02080 365 aaPredicted RBP15.63■□□□□ 0.09
MMP28-204ENST00000615136 HNF4GQ14541 408 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.63■□□□□ 0.09
MMP28-204ENST00000615136 WDR83OSQ9Y284 106 aa15.63■□□□□ 0.09
MMP28-204ENST00000615136 C17orf112F2Z3M2 114 aa15.62■□□□□ 0.09
MMP28-204ENST00000615136 S100A8P05109 93 aa15.62■□□□□ 0.09
MMP28-204ENST00000615136 CXCL1P09341 107 aa15.62■□□□□ 0.09
MMP28-204ENST00000615136 NQO2P16083 231 aa15.62■□□□□ 0.09
MMP28-204ENST00000615136 FABP9Q0Z7S8 132 aa15.62■□□□□ 0.09
MMP28-204ENST00000615136 WDR25Q64LD2 544 aaPredicted RBP15.62■□□□□ 0.09
MMP28-204ENST00000615136 ZNF709Q8N972 641 aa15.62■□□□□ 0.09
MMP28-204ENST00000615136 ACTR3CQ9C0K3 210 aaPredicted RBP15.62■□□□□ 0.09
MMP28-204ENST00000615136 VDAC2P45880 294 aaPredicted RBP15.61■□□□□ 0.09
MMP28-204ENST00000615136 RPS10P46783 165 aaKnown RBP15.61■□□□□ 0.09
MMP28-204ENST00000615136 RND2P52198 227 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 RELBQ01201 579 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 LRRC10Q5BKY1 277 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 OR4A16Q8NH70 328 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 GAL3ST2Q9H3Q3 398 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 MANBALQ9NQG1 85 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 KAAG1Q9UBP8 84 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 AP4M1O00189 453 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 CT45A6P0DMU7 189 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 CT45A5P0DMU8 189 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 CT45A7P0DMV0 189 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 RPP30P78346 268 aaKnown RBP15.61■□□□□ 0.09
MMP28-204ENST00000615136 OR4S2Q8NH73 311 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 TMEM140Q9NV12 185 aa15.61■□□□□ 0.09
MMP28-204ENST00000615136 TMEM250H0YL14 139 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 PSMB3P49720 205 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 RAB24Q969Q5 203 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 PRSS46E5RG02 174 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 SOX15O60248 233 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 SMIM6P0DI80 62 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 CD1BP29016 333 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 THBS3P49746 956 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 DLX6P56179 175 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 CYP2G1PQ6ZSU1 146 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 GGACTQ9BVM4 153 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 TMPRSS5Q9H3S3 457 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 URGCP-MRPS24S4R325 110 aa15.6■□□□□ 0.09
MMP28-204ENST00000615136 A0A1W2PPR1 153 aa15.59■□□□□ 0.09
MMP28-204ENST00000615136 PCP4L1A6NKN8 68 aa15.59■□□□□ 0.09
MMP28-204ENST00000615136 IGKV1-16P04430 117 aa15.59■□□□□ 0.09
MMP28-204ENST00000615136 DLX1P56177 255 aa15.59■□□□□ 0.09
MMP28-204ENST00000615136 DIAPH2-AS1Q14236 149 aa15.59■□□□□ 0.09
MMP28-204ENST00000615136 ACOT6Q3I5F7 207 aaPredicted RBP15.59■□□□□ 0.09
MMP28-204ENST00000615136 IQCF2Q8IXL9 164 aa15.59■□□□□ 0.09
MMP28-204ENST00000615136 NAT8Q9UHE5 227 aa15.59■□□□□ 0.09
MMP28-204ENST00000615136 TGIF2-C20orf24A0A0A6YYL0 155 aa15.58■□□□□ 0.09
MMP28-204ENST00000615136 SEC14L6B5MCN3 397 aa15.58■□□□□ 0.09
MMP28-204ENST00000615136 CLDN34H7C241 214 aa15.58■□□□□ 0.09
MMP28-204ENST00000615136 HMGB3O15347 200 aaKnown RBP15.58■□□□□ 0.09
MMP28-204ENST00000615136 MPDU1O75352 247 aa15.58■□□□□ 0.09
MMP28-204ENST00000615136 KBTBD11O94819 623 aa15.58■□□□□ 0.09
MMP28-204ENST00000615136 MYOD1P15172 320 aa15.58■□□□□ 0.09
MMP28-204ENST00000615136 GNLYP22749 145 aa15.58■□□□□ 0.09
MMP28-204ENST00000615136 TCEAL7Q9BRU2 100 aa15.58■□□□□ 0.09
MMP28-204ENST00000615136 TACC2O95359 2948 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 C15orf61A6NNL5 157 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 CYB5BO43169 146 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 SOD3P08294 240 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 CDC34P49427 236 aaPredicted RBP15.58■□□□□ 0.08
MMP28-204ENST00000615136 TMEM30BQ3MIR4 351 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 OR4A47Q6IF82 309 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 C11orf42Q8N5U0 333 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 OR10A7Q8NGE5 316 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 RHOVQ96L33 236 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 SMIM7Q9BQ49 75 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 CTDSP1Q9GZU7 261 aa15.58■□□□□ 0.08
MMP28-204ENST00000615136 IFNA10P01566 189 aa15.57■□□□□ 0.08
MMP28-204ENST00000615136 REG1BP48304 166 aa15.57■□□□□ 0.08
MMP28-204ENST00000615136 PRB3Q04118 309 aaPredicted RBP15.57■□□□□ 0.08
MMP28-204ENST00000615136 KIAA0141Q14154 515 aaPredicted RBP15.57■□□□□ 0.08
MMP28-204ENST00000615136 TMEM249Q2WGJ8 235 aa15.57■□□□□ 0.08
MMP28-204ENST00000615136 TMEM155Q4W5P6 130 aa15.57■□□□□ 0.08
MMP28-204ENST00000615136 ZNF841Q6ZN19 808 aa15.57■□□□□ 0.08
MMP28-204ENST00000615136 ZNF833PQ6ZTB9 187 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms