RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MZT2BQ6NZ67 158 aa10.4□□□□□ -0.74
MDC1-209ENST00000613547 ZNF695Q8IW36 515 aa10.4□□□□□ -0.74
MDC1-209ENST00000613547 RBPMSQ93062 196 aaKnown RBP10.4□□□□□ -0.74
MDC1-209ENST00000613547 TMEM230Q96A57 120 aa10.4□□□□□ -0.74
MDC1-209ENST00000613547 SEC22AQ96IW7 307 aa10.4□□□□□ -0.74
MDC1-209ENST00000613547 ZFP57Q9NU63 452 aa10.4□□□□□ -0.74
MDC1-209ENST00000613547 PLA2G10O15496 165 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 RBMXL2O75526 392 aaKnown RBP10.39□□□□□ -0.75
MDC1-209ENST00000613547 CDS2O95674 445 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 IGKV1-39P01597 117 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 IGKV1D-39P04432 117 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 IL6RP08887 468 aaPredicted RBP10.39□□□□□ -0.75
MDC1-209ENST00000613547 PSMB8P28062 276 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 DEFA1P59665 94 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 DEFA3P59666 94 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 UBE2MP61081 183 aaKnown RBP10.39□□□□□ -0.75
MDC1-209ENST00000613547 ASAH1Q13510 395 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 NSUN5P1Q3KNT7 163 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 C19orf54Q5BKX5 351 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 C10orf55Q5SWW7 151 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 THOC7Q6I9Y2 204 aaKnown RBP10.39□□□□□ -0.75
MDC1-209ENST00000613547 SLC25A42Q86VD7 318 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 FAM219AQ8IW50 185 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 RNF152Q8N8N0 203 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 OR4A16Q8NH70 328 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 GLYATL2Q8WU03 294 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 IL22RA2Q969J5 263 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 FYTTD1Q96QD9 318 aaKnown RBP10.39□□□□□ -0.75
MDC1-209ENST00000613547 ZNF355PQ9NSJ1 428 aa10.39□□□□□ -0.75
MDC1-209ENST00000613547 TRAV3A0A0B4J244 114 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 A0A1W2PRX2 142 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 C15orf61A6NNL5 157 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 NUDT19A8MXV4 375 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 H3BUA1 57 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 IGLV1-40P01703 118 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 OR9G9P0C7N8 305 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 SLC6A1P30531 599 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 BTCP35070 178 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 RAB25P57735 213 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 TMEM268Q5VZI3 342 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 HSD17B13Q7Z5P4 300 aaPredicted RBP10.38□□□□□ -0.75
MDC1-209ENST00000613547 MRPL41Q8IXM3 137 aaKnown RBP10.38□□□□□ -0.75
MDC1-209ENST00000613547 LGI3Q8N145 548 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 OR5T1Q8NG75 326 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 OR4F17Q8NGA8 305 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 OR1L8Q8NGR8 309 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 OR5B3Q8NH48 314 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 FAM110DQ8TAY7 271 aaPredicted RBP10.38□□□□□ -0.75
MDC1-209ENST00000613547 TMEM56Q96MV1 263 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 OR4F4Q96R69 305 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 SRSF8Q9BRL6 282 aaKnown RBP10.38□□□□□ -0.75
MDC1-209ENST00000613547 QTRT1Q9BXR0 403 aaKnown RBP10.38□□□□□ -0.75
MDC1-209ENST00000613547 SLA2Q9H6Q3 261 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 COA4Q9NYJ1 87 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 TMEM56-RWDD3S4R434 201 aa10.38□□□□□ -0.75
MDC1-209ENST00000613547 FAM240BA0A1B0GVZ2 78 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 DHFRP00374 187 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 IGKV1-5P01602 117 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 RPLP1P05386 114 aaKnown RBP10.37□□□□□ -0.75
MDC1-209ENST00000613547 APELAP0DMC3 54 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 RAB9AP51151 201 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 OR2B8PP59922 312 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 RPL23AP62750 156 aaKnown RBP10.37□□□□□ -0.75
MDC1-209ENST00000613547 SUPT4H1P63272 117 aaKnown RBP10.37□□□□□ -0.75
MDC1-209ENST00000613547 TMEM187Q14656 261 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 SELENOHQ8IZQ5 122 aaKnown RBP10.37□□□□□ -0.75
MDC1-209ENST00000613547 PDCD10Q9BUL8 212 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 HINT2Q9BX68 163 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 TMEM14BQ9NUH8 114 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 ZNF257Q9Y2Q1 563 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 NSG2Q9Y328 171 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 OR51B2Q9Y5P1 312 aa10.37□□□□□ -0.75
MDC1-209ENST00000613547 A0A0B4J2A0 478 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 TEX50A0A1B0GTY4 177 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 TEX22C9J3V5 150 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 CYB5BO43169 146 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 SOX15O60248 233 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 TCRBP04435 133 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 TRAPPC2P0DI81 140 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 TRAPPC2BP0DI82 140 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 CDX1P47902 265 aaPredicted RBP10.36□□□□□ -0.75
MDC1-209ENST00000613547 TPPP2P59282 170 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 PPP1R1AQ13522 171 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 C4orf46Q504U0 113 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 ASPHD1Q5U4P2 390 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 HIST2H2BDQ6DRA6 164 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 TTC9CQ8N5M4 171 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 ENKURQ8TC29 256 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 CASTOR1Q8WTX7 329 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 LSM10Q969L4 123 aaKnown RBP10.36□□□□□ -0.75
MDC1-209ENST00000613547 UBE2E2Q96LR5 201 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 MS4A10Q96PG2 267 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 C20orf85Q9H1P6 137 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 CACFD1Q9UGQ2 172 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 SHPKQ9UHJ6 478 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 TBC1D24Q9ULP9 559 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 FLVCR2Q9UPI3 526 aa10.36□□□□□ -0.75
MDC1-209ENST00000613547 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
MDC1-209ENST00000613547 DUXBA0A1W2PPF3 345 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms