RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 S100A11P31949 105 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 MC5RP33032 325 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 SAA4P35542 130 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 CEACAM3P40198 252 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 PAX9P55771 341 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 OR2F1Q13607 317 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 FBLN7Q53RD9 439 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 MINOS1Q5TGZ0 78 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 PUSL1Q8N0Z8 303 aaKnown RBP6.5□□□□□ -1.37
TARDBP-213ENST00000611963 OR8H3Q8N146 312 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 OR4C13Q8NGP0 309 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 OSR1Q8TAX0 266 aaPredicted RBP6.5□□□□□ -1.37
TARDBP-213ENST00000611963 CFHR4Q92496 578 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 TPSG1Q9NRR2 321 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 HSPB7Q9UBY9 170 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 MINOS1-NBL1R4GNA1 71 aa6.5□□□□□ -1.37
TARDBP-213ENST00000611963 IGHV1-69DA0A0B4J2H0 117 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 A0A0D9SG52 128 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 CEBPZOSA8MTT3 80 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 FAM90A26D6RGX4 464 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 EREGO14944 169 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 BCL2L11O43521 198 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 SLC25A17O43808 307 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 GPR137BO60478 399 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 TGFAP01135 160 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 IFNA17P01571 189 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 IGKV1D-33P01593 117 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 IGKV1-33P01594 117 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 IGHV1-69P01742 117 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 IL6RP08887 468 aaPredicted RBP6.49□□□□□ -1.37
TARDBP-213ENST00000611963 IGHV4-38-2P0DP08 117 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 PVALBP20472 110 aaPredicted RBP6.49□□□□□ -1.37
TARDBP-213ENST00000611963 P2RY1P47900 373 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 CAV2P51636 162 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 UBE2KP61086 200 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 TMEM267Q0VDI3 215 aaPredicted RBP6.49□□□□□ -1.37
TARDBP-213ENST00000611963 HNF4GQ14541 408 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 ZNF345Q14585 488 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 TMEM249Q2WGJ8 235 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 BRD3OSQ6XYD6 125 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 OR2C3Q8N628 320 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 AQP10Q96PS8 301 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 SMIM3Q9BZL3 60 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 C7orf69Q9H7B7 122 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 TMEM14BQ9NUH8 114 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 BET1LQ9NYM9 111 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 NUP50Q9UKX7 468 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 TCF19Q9Y242 345 aa6.49□□□□□ -1.37
TARDBP-213ENST00000611963 FOXA2Q9Y261 457 aaPredicted RBP6.49□□□□□ -1.37
TARDBP-213ENST00000611963 TBL2Q9Y4P3 447 aaKnown RBP6.49□□□□□ -1.37
TARDBP-213ENST00000611963 SOX21Q9Y651 276 aaPredicted RBP6.49□□□□□ -1.37
TARDBP-213ENST00000611963 KANTRA0A1W2PQU2 76 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 OOSP1A8MZH6 123 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 INAFM1C9JVW0 142 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 MED6O75586 246 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 CST7O76096 145 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 KBTBD11O94819 623 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 OPN1MWP04001 364 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 SNRNP70P08621 437 aaKnown RBP6.48□□□□□ -1.37
TARDBP-213ENST00000611963 OPN1MW2P0DN77 364 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 OPN1MW3P0DN78 364 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 C4BPBP20851 252 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 CD1BP29016 333 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 HOXA1P49639 335 aaPredicted RBP6.48□□□□□ -1.37
TARDBP-213ENST00000611963 SPCS3P61009 180 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 RPL23AP62750 156 aaKnown RBP6.48□□□□□ -1.37
TARDBP-213ENST00000611963 EWSR1Q01844 656 aaKnown RBP eCLIP6.48□□□□□ -1.37
TARDBP-213ENST00000611963 PJVKQ0ZLH3 352 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 PSG5Q15238 335 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 VMA21Q3ZAQ7 101 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 AARDQ4LEZ3 155 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 C10orf55Q5SWW7 151 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 FAM120AOSQ5T036 256 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 CCDC144NLQ6NUI1 221 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 OR8H1Q8NGG4 311 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 DTD1Q8TEA8 209 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 OR4C12Q96R67 309 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 RAB40CQ96S21 281 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 TSNAXQ99598 290 aaKnown RBP6.48□□□□□ -1.37
TARDBP-213ENST00000611963 ARPC5LQ9BPX5 153 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 AIFM2Q9BRQ8 373 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 HINT2Q9BX68 163 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 FBXL15Q9H469 300 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 ZNF430Q9H8G1 570 aaPredicted RBP6.48□□□□□ -1.37
TARDBP-213ENST00000611963 LYRM2Q9NU23 88 aaPredicted RBP6.48□□□□□ -1.37
TARDBP-213ENST00000611963 PSENENQ9NZ42 101 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 FBXL17Q9UF56 701 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 OR51B2Q9Y5P1 312 aa6.48□□□□□ -1.37
TARDBP-213ENST00000611963 HIVEP2P31629 2446 aa6.47□□□□□ -1.37
TARDBP-213ENST00000611963 MXRA5Q9NR99 2828 aa6.47□□□□□ -1.37
TARDBP-213ENST00000611963 TEX50A0A1B0GTY4 177 aa6.47□□□□□ -1.37
TARDBP-213ENST00000611963 MOSP00540 346 aa6.47□□□□□ -1.37
TARDBP-213ENST00000611963 CFDP00746 253 aaPredicted RBP6.47□□□□□ -1.37
TARDBP-213ENST00000611963 CRYGBP07316 175 aa6.47□□□□□ -1.37
TARDBP-213ENST00000611963 METTL15P1P0C7V9 234 aa6.47□□□□□ -1.37
TARDBP-213ENST00000611963 GATA3P23771 443 aa6.47□□□□□ -1.37
TARDBP-213ENST00000611963 VDAC2P45880 294 aaPredicted RBP6.47□□□□□ -1.37
TARDBP-213ENST00000611963 LGALS7P47929 136 aa6.47□□□□□ -1.37
TARDBP-213ENST00000611963 DYNLT3P51808 116 aa6.47□□□□□ -1.37
TARDBP-213ENST00000611963 ARHGDIBP52566 201 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms