RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SRSF6Q13247 344 aaKnown RBP7.24□□□□□ -1.25
LIG4-204ENST00000611712 FAM216BQ8N7L0 139 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 OR1L4Q8NGR5 311 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 SFRP2Q96HF1 295 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 VAMP8Q9BV40 100 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 WDR83OSQ9Y284 106 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 PPIAL4EA0A075B759 164 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 PPIAL4DF5H284 164 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 RRHO14718 337 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 PPIAL4FP0DN26 164 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 COX7A1P24310 79 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 GNB2P62879 340 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 OR4A47Q6IF82 309 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 TMEM242Q9NWH2 141 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 PPIAL4AQ9Y536 164 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 NUP210LQ5VU65 1888 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 TRBV24-1A0A075B6N3 115 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 PGPEP1LA6NFU8 196 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 HSBP1L1C9JCN9 74 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 YPEL1O60688 119 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 SELLP14151 372 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 CRYBB3P26998 211 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 CHRNB4P30926 498 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 CAMPP49913 170 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 TNXAQ16473 311 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 WDR73Q6P4I2 378 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 CD177Q8N6Q3 437 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 ZNF714Q96N38 554 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 YPEL2Q96QA6 119 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 ADAMTS9Q9P2N4 1935 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 KBTBD11-OT1A0A1B0GTJ5 212 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 SCO2A0A1W2PP80 73 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.23□□□□□ -1.25
LIG4-204ENST00000611712 SOD3P08294 240 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 RPL8P62917 257 aaKnown RBP7.23□□□□□ -1.25
LIG4-204ENST00000611712 HLA-DRB5Q30154 266 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 PQLC2Q6ZP29 291 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 OR8I2Q8N0Y5 310 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 OR1B1Q8NGR6 318 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 NABP2Q9BQ15 211 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 CHRDL1Q9BU40 450 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 IGHV3-72A0A0B4J1Y9 119 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 GRIFINA4D1Z8 144 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 ZNF729A6NN14 1252 aaPredicted RBP7.23□□□□□ -1.25
LIG4-204ENST00000611712 IGHV3-48P01763 117 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 LINC00869P0C866 280 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 IGFBP2P18065 325 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 RNF2Q99496 336 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 SRRM5B3KS81 715 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 GCGP01275 180 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 OR4A8P0C604 315 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 C1QTNF9P0C862 333 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 ERVK11-1P61568 191 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 PYY3Q5JQD4 70 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 C10orf113Q5VZT2 155 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 ETFRF1Q6IPR1 90 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 HIST3H2BBQ8N257 126 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 OR5AU1Q8NGC0 362 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 PRR7Q8TB68 274 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 RPEQ96AT9 228 aa7.23□□□□□ -1.25
LIG4-204ENST00000611712 H0Y8G0 127 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 PLAUP00749 431 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 CGAP01215 116 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 RBP4P02753 201 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 ZNF726P1Q15940 193 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 S100A7AQ86SG5 101 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 PDPNQ86YL7 162 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 TBX15Q96SF7 602 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 SAA2-SAA4A0A096LPE2 208 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 IGHV3-21A0A0B4J1V1 117 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 SLC17A3O00476 420 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 CHEK1O14757 476 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 SAA2P0DJI9 122 aaPredicted RBP7.22□□□□□ -1.25
LIG4-204ENST00000611712 CBLN1P23435 193 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 LGALS4P56470 323 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 LCN2P80188 198 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 FXYD3Q14802 87 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 Q6ZPA2 131 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 HAPLN4Q86UW8 402 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 UNC80Q8N2C7 3258 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 TECTAO75443 2155 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 K7EQM0 130 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 HIST1H1BP16401 226 aaKnown RBP7.22□□□□□ -1.25
LIG4-204ENST00000611712 RAB4AP20338 218 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 FOXC1Q12948 553 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 FAM90A1Q86YD7 464 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 MRPL18Q9H0U6 180 aaKnown RBP7.22□□□□□ -1.25
LIG4-204ENST00000611712 PLSCR4Q9NRQ2 329 aa7.22□□□□□ -1.25
LIG4-204ENST00000611712 C20orf202A1L168 122 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 USF1P22415 310 aaPredicted RBP7.21□□□□□ -1.25
LIG4-204ENST00000611712 GATA2P23769 480 aaPredicted RBP7.21□□□□□ -1.25
LIG4-204ENST00000611712 PAX5Q02548 391 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 TMEM183BQ1AE95 376 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 KRTCAP3Q53RY4 240 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 TREML4Q6UXN2 200 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 STARD4Q96DR4 205 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 TIMD4Q96H15 378 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 HIST1H2BLQ99880 126 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 PAXXQ9BUH6 204 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 KLF2Q9Y5W3 355 aaPredicted RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms