RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	CTXND1	A0A1B0GTU2	59 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	DEFB108A	A8MXU0	73 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	ST8SIA5	O15466	376 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	HRAS	P01112	189 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	GALR1	P47211	349 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	RAB4B	P61018	213 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	EDDM3A	Q14507	147 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	OR8G2P	Q6IF36	304 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	TMEM170A	Q8WVE7	144 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	PRO1933	Q9H354	126 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	RNF7	Q9UBF6	113 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	HIVEP3	Q5T1R4	2406 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	USP24	Q9UPU5	2620 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	ROS1	P08922	2347 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	KALRN	O60229	2985 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614		A0A1B0GV90	55 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	LINC00473	A8K010	186 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614		B9A039	149 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	GZMH	P20718	246 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	SRP14	P37108	136 aa	Known RBP	11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	CCL8	P80075	99 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	H2BFWT	Q7Z2G1	175 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	OR51G1	Q8NGK1	321 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	PPP1R35	Q8TAP8	253 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	BTF3L4	Q96K17	158 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	GCM1	Q9NP62	436 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	CLN8	Q9UBY8	286 aa		11.46	□□□□□ -0.57
COPS7B-223	ENST00000611614	UBE2L5P	A0A1B0GUS4	154 aa		11.46	□□□□□ -0.58
COPS7B-223	ENST00000611614	MGST3	O14880	152 aa		11.46	□□□□□ -0.58
COPS7B-223	ENST00000611614	GZMB	P10144	247 aa		11.46	□□□□□ -0.58
COPS7B-223	ENST00000611614	RPL23	P62829	140 aa	Known RBP	11.46	□□□□□ -0.58
COPS7B-223	ENST00000611614	NEUROG1	Q92886	237 aa		11.46	□□□□□ -0.58
COPS7B-223	ENST00000611614	SAP30L	Q9HAJ7	183 aa		11.46	□□□□□ -0.58
COPS7B-223	ENST00000611614	XKRY2	A2RUG3	117 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	VENTX	O95231	258 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	TYMS	P04818	313 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	ELL	P55199	621 aa	Predicted RBP	11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	GCSAM	Q8N6F7	178 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	DTD1	Q8TEA8	209 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	FAM216A	Q8WUB2	273 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	CIB3	Q96Q77	187 aa	Predicted RBP	11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	TMEM147	Q9BVK8	224 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614		A8MWP6	167 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	PLAU	P00749	431 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	CD55	P08174	381 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	GPR12	P47775	334 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	EFNB3	Q15768	340 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	LTC4S	Q16873	150 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	CR1L	Q2VPA4	569 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	NDUFAF3	Q9BU61	184 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	PPP1R14D	Q9NXH3	145 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	JPT1	Q9UK76	154 aa		11.45	□□□□□ -0.58
COPS7B-223	ENST00000611614	ADGRG4	Q8IZF6	3080 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	IGHV3OR15-7	A0A075B7D8	119 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	GGCT	O75223	188 aa	Known RBP	11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	TMEM11	P17152	192 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	ZNF124	Q15973	351 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	ZNF672	Q499Z4	452 aa	Predicted RBP	11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	MUC15	Q8N387	334 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	RPP25L	Q8N5L8	163 aa	Known RBP	11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	GNG12	Q9UBI6	72 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	SPTBN1	Q01082	2364 aa	Known RBP	11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	CHD3	Q12873	2000 aa	Known RBP	11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	PMS2P5	A8MQ11	134 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	LINC00205	P59089	165 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	MORN2	Q502X0	79 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	SPRN	Q5BIV9	151 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	ACTL10	Q5JWF8	245 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614		Q8TCH9	128 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	TMEM18	Q96B42	140 aa		11.44	□□□□□ -0.58
COPS7B-223	ENST00000611614	IGSF10	Q6WRI0	2623 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	MARCH11	A6NNE9	402 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	YPEL1	O60688	119 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	RBMXL2	O75526	392 aa	Known RBP	11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	DUT	P33316	252 aa	Known RBP	11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	KCNIP4	Q6PIL6	250 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	OR10P1	Q8NGE3	313 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	R3HDM4	Q96D70	268 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	YPEL2	Q96QA6	119 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	PARL	Q9H300	379 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	CACNA1D	Q01668	2161 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	LHB	P01229	141 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	LCN2	P80188	198 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	SSX2	Q16385	188 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	OR2T10	Q8NGZ9	312 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	ZDHHC16	Q969W1	377 aa		11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	RPUSD4	Q96CM3	377 aa	Known RBP	11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	NEIL1	Q96FI4	390 aa	Predicted RBP	11.43	□□□□□ -0.58
COPS7B-223	ENST00000611614	USF3	Q68DE3	2245 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	F2RL2	O00254	374 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	SIAH2	O43255	324 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	PROP1	O75360	226 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	GYPA	P02724	150 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	RNF224	P0DH78	156 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	MDK	P21741	143 aa	Predicted RBP	11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	SOX15	O60248	233 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	HPRT1	P00492	218 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms