RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 OR4A47Q6IF82 309 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 TOLLIPQ9H0E2 274 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 RPRMQ9NS64 109 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 ANKRD11Q6UB99 2663 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 CHD8Q9HCK8 2581 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 SAA2-SAA4A0A096LPE2 208 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 HELTA6NFD8 242 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 TSTD3H0UI37 97 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 K7EM74 188 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 DNASE2O00115 360 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 MPDU1O75352 247 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 CA2P00918 260 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 SAA2P0DJI9 122 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 EGR1P18146 543 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 PPOXP50336 477 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 MEF2CQ06413 473 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 PNRC1Q12796 327 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 FXYD3Q14802 87 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 MBNL2Q5VZF2 373 aaKnown RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 GRAMD2BQ96HH9 432 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 HSPB1P04792 205 aaKnown RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 TMEM30BQ3MIR4 351 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 OR5AU1Q8NGC0 362 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 OR10G8Q8NGN5 311 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 RBM14Q96PK6 669 aaKnown RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 PAXXQ9BUH6 204 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 RNF126Q9BV68 326 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 CBLN4Q9NTU7 201 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 NAGKQ9UJ70 344 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 TRAPPC1Q9Y5R8 145 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 S4R3C0 116 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 H3BTX0 84 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 NDUFB4O95168 129 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 HOXA4Q00056 320 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 C16orf82Q7Z2V1 217 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 LHFPL1Q86WI0 220 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 WFDC3Q8IUB2 231 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 OR4A5Q8NH83 315 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 FAM168AQ92567 244 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 AP1S3Q96PC3 154 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 RARRES2Q99969 163 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 C1QTNF9BB2RNN3 333 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 YPEL1O60688 119 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 NAPSAO96009 420 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 C1QTNF9P0C862 333 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 FABP4P15090 132 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 SUPT4H1P63272 117 aaKnown RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 MEF2BQ02080 365 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF672Q499Z4 452 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF324BQ6AW86 544 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 DNM1P46Q6ZS02 220 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 LDLRAD3Q86YD5 345 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 CD177Q8N6Q3 437 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 OSR1Q8TAX0 266 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 YPEL2Q96QA6 119 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 HIGD1AQ9Y241 93 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 TMEM56-RWDD3S4R434 201 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 KIAA1324LA8MWY0 1029 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 FCN1O00602 326 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 TNFSF13O75888 250 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 SELENOTP62341 195 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 IGFL3Q6UXB1 125 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 COLCA1Q6ZS62 124 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 PUSL1Q8N0Z8 303 aaKnown RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 STXBP6Q8NFX7 210 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF430Q9H8G1 570 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-218ENST00000610726 RABAC1Q9UI14 185 aa6.07□□□□□ -1.44
CSDE1-218ENST00000610726 TGOLN2O43493 480 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 MOSP00540 346 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 IGKV1D-33P01593 117 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 IGKV1-33P01594 117 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 ACAA1P09110 424 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-218ENST00000610726 DANCRP0C864 163 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 RD3LP0DJH9 198 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 RANBP2P49792 3224 aaKnown RBP6.06□□□□□ -1.44
CSDE1-218ENST00000610726 AARDQ4LEZ3 155 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 PCSK4Q6UW60 755 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 SLC16A13Q7RTY0 426 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 OR2T10Q8NGZ9 312 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 OR5R1Q8NH85 324 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 C20orf202A1L168 122 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 CORTO00230 105 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 HSBP1O75506 76 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 DKK1O94907 266 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 COL8A1P27658 744 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 LOXL3P58215 753 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 ADIPOQQ15848 244 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 WDR61Q9GZS3 305 aaKnown RBP6.06□□□□□ -1.44
CSDE1-218ENST00000610726 IGHV3OR16-13A0A075B7E8 117 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 IGHV3-74A0A0B4J1X5 117 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 PDE6DO43924 150 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 CD55P08174 381 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 MDKP21741 143 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-218ENST00000610726 CA7P43166 264 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 LINC00205P59089 165 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 MRPL54Q6P161 138 aaKnown RBP6.06□□□□□ -1.44
CSDE1-218ENST00000610726 C20orf204Q6ZNR8 217 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 SGK494Q96LW2 274 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 PCNX3Q9H6A9 2034 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms