RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 JOSD1Q15040 202 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 OR8G1Q15617 311 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 TAF9Q16594 264 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 ZNF404Q494X3 552 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 IBA57Q5T440 356 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 PRR9Q5T870 116 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 GLYATQ6IB77 296 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 SBSNQ6UWP8 590 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 SGPP2Q8IWX5 399 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 BAP18Q8IXM2 172 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 ZNF101Q8IZC7 436 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 GDPD1Q8N9F7 314 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 ST20-AS1Q8NBB2 130 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 NUP35Q8NFH5 326 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 OR5A1Q8NGJ0 315 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 CT55Q8WUE5 264 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 SLC7A6Q92536 515 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 ROPN1LQ96C74 230 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 ADAT3Q96EY9 351 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 IP6K3Q96PC2 410 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 SFXN3Q9BWM7 321 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 LINC00470Q9BZP3 86 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 YIPF3Q9GZM5 350 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 POPDC3Q9HBV1 291 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 NIT2Q9NQR4 276 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 SSR3Q9UNL2 185 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 NOS1P29475 1434 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 MED14O60244 1454 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 PHLPP1O60346 1717 aa2.31□□□□□ -2.04
SMCHD1-213ENST00000609587 DYSFO75923 2080 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 IGHV2-26A0A0B4J1V2 119 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 CCL15-CCL14A0A0B4J2E2 113 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 LOC102725191A0A1B0GVB3 256 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 C5orf49A4QMS7 147 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 LY6LH3BQJ8 138 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 M0R1X1 148 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 MYL12BO14950 172 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 GGCTO75223 188 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 FSTL3O95633 263 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 FAM107AO95990 144 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 CPMP14384 443 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 G6PCP35575 357 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 HIST1H1AQ02539 215 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM267Q0VDI3 215 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 LAMTOR4Q0VGL1 99 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 FUT5Q11128 374 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 BTN1A1Q13410 526 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 CCL15Q16663 113 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 ZNF181Q2M3W8 571 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 CENPWQ5EE01 88 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 Q5XG85 94 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 TCF23Q7RTU1 214 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 LHFPL1Q86WI0 220 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM86AQ8N2M4 240 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 DRAM1Q8N682 238 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 MIR7-3HGQ8N6C7 128 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 OR5K1Q8NHB7 308 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 SLC25A44Q96H78 314 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 CNBD2Q96M20 576 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 LXNQ9BS40 222 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 ULBP3Q9BZM4 244 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 SLC23A2Q9UGH3 650 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 RTL1A6NKG5 1358 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 ARHGAP31Q2M1Z3 1444 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 NEO1Q92859 1461 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 FOCADQ5VW36 1801 aa2.3□□□□□ -2.04
SMCHD1-213ENST00000609587 DOCK8Q8NF50 2099 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 BAZ1BQ9UIG0 1483 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 PRG4Q92954 1404 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 TRAV8-3A0A0A6YYJ7 113 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 TRAV4A0A0B4J268 109 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM269A0A1B0GVZ9 245 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 FABP5P3A8MUU1 101 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 CORTO00230 105 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 GYG2O15488 501 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 DHRS3O75911 302 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 NRASP01111 189 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 HBZP02008 142 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 RPS4Y1P22090 263 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 RPL35P42766 123 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 SLC18A1P54219 525 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 KCNJ8Q15842 424 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 CCSMST1Q4G0I0 132 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 C6orf99Q4VX62 202 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 GLYATL3Q5SZD4 288 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 FAM19A3Q7Z5A8 133 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 APCDD1LQ8NCL9 501 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 KLK6Q92876 244 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM159Q96B96 161 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 FXYD5Q96DB9 178 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 MALSU1Q96EH3 234 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 SMIM8Q96KF7 97 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 CARD19Q96LW7 228 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 C20orf27Q9GZN8 174 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 SLC25A31Q9H0C2 315 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 PLEKHF2Q9H8W4 249 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 NAT8BQ9UHF3 227 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 MCTS1Q9ULC4 181 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 ZFP30Q9Y2G7 519 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms