RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CD1BP29016 333 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 SLC25A17O43808 307 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 MYOD1P15172 320 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 HABP2Q14520 560 aaPredicted RBP17.37■□□□□ 0.37
USP6NL-204ENST00000606752 OR8G2PQ6IF36 304 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 CCDC144NLQ6NUI1 221 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 TEX45Q8NA69 505 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 LRRC20Q8TCA0 184 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 RNF141Q8WVD5 230 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 ENY2Q9NPA8 101 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 C15orf62A8K5M9 175 aa17.36■□□□□ 0.37
USP6NL-204ENST00000606752 PMS2P5A8MQ11 134 aa17.36■□□□□ 0.37
USP6NL-204ENST00000606752 SEC11BP0C7V7 166 aa17.36■□□□□ 0.37
USP6NL-204ENST00000606752 PRCDQ00LT1 54 aa17.36■□□□□ 0.37
USP6NL-204ENST00000606752 HSD17B11Q8NBQ5 300 aa17.36■□□□□ 0.37
USP6NL-204ENST00000606752 OR10P1Q8NGE3 313 aa17.36■□□□□ 0.37
USP6NL-204ENST00000606752 COMMD5Q9GZQ3 224 aa17.36■□□□□ 0.37
USP6NL-204ENST00000606752 TBL2Q9Y4P3 447 aaKnown RBP17.36■□□□□ 0.37
USP6NL-204ENST00000606752 SCAF4O95104 1147 aaKnown RBP17.35■□□□□ 0.37
USP6NL-204ENST00000606752 IFNA10P01566 189 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 FAM157CP0CG43 387 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 SPP1P10451 314 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 SSX2Q16385 188 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 DEFB113Q30KQ7 82 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 LILRB2Q8N423 598 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 CFHR4Q92496 578 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 HINT2Q9BX68 163 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 TNCP24821 2201 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 VENTXO95231 258 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 IFNA5P01569 189 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 SLC38A11Q08AI6 406 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 ATP6V1FQ16864 119 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 LRRC75A-AS1Q8N1F1 130 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 OR1L8Q8NGR8 309 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 PINX1Q96BK5 328 aaKnown RBP17.35■□□□□ 0.37
USP6NL-204ENST00000606752 PLEKHA3Q9HB20 300 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 DOPEY2Q9Y3R5 2298 aa17.35■□□□□ 0.37
USP6NL-204ENST00000606752 FGF16O43320 207 aa17.34■□□□□ 0.37
USP6NL-204ENST00000606752 OPN1MWP04001 364 aa17.34■□□□□ 0.37
USP6NL-204ENST00000606752 CRYGBP07316 175 aa17.34■□□□□ 0.37
USP6NL-204ENST00000606752 MSMBP08118 114 aa17.34■□□□□ 0.37
USP6NL-204ENST00000606752 OPN1MW2P0DN77 364 aa17.34■□□□□ 0.37
USP6NL-204ENST00000606752 OPN1MW3P0DN78 364 aa17.34■□□□□ 0.37
USP6NL-204ENST00000606752 PSG5Q15238 335 aa17.34■□□□□ 0.37
USP6NL-204ENST00000606752 MALSU1Q96EH3 234 aa17.34■□□□□ 0.37
USP6NL-204ENST00000606752 ZNF430Q9H8G1 570 aaPredicted RBP17.34■□□□□ 0.37
USP6NL-204ENST00000606752 CELSR2Q9HCU4 2923 aa17.34■□□□□ 0.37
USP6NL-204ENST00000606752 TET2Q6N021 2002 aaPredicted RBP17.34■□□□□ 0.37
USP6NL-204ENST00000606752 CNTFRP26992 372 aa17.33■□□□□ 0.37
USP6NL-204ENST00000606752 NDUFA4L2Q9NRX3 87 aa17.33■□□□□ 0.37
USP6NL-204ENST00000606752 B4DSR2 109 aa17.33■□□□□ 0.36
USP6NL-204ENST00000606752 ATP6V0CP27449 155 aa17.33■□□□□ 0.36
USP6NL-204ENST00000606752 SULT1A2P50226 295 aa17.33■□□□□ 0.36
USP6NL-204ENST00000606752 THNSL2Q86YJ6 484 aa17.33■□□□□ 0.36
USP6NL-204ENST00000606752 DYNAPQ8N1N2 210 aa17.33■□□□□ 0.36
USP6NL-204ENST00000606752 GNPNAT1Q96EK6 184 aaPredicted RBP17.33■□□□□ 0.36
USP6NL-204ENST00000606752 SH3BGRL3Q9H299 93 aa17.33■□□□□ 0.36
USP6NL-204ENST00000606752 PLA2G2EQ9NZK7 142 aa17.33■□□□□ 0.36
USP6NL-204ENST00000606752 SIGLEC9Q9Y336 463 aa17.33■□□□□ 0.36
USP6NL-204ENST00000606752 TENM4Q6N022 2769 aa17.32■□□□□ 0.36
USP6NL-204ENST00000606752 RRHO14718 337 aa17.32■□□□□ 0.36
USP6NL-204ENST00000606752 OR8U8P0C7N1 319 aa17.32■□□□□ 0.36
USP6NL-204ENST00000606752 MRGPRG-AS1Q2M3A8 158 aa17.32■□□□□ 0.36
USP6NL-204ENST00000606752 SLC25A24Q6NUK1 477 aa17.32■□□□□ 0.36
USP6NL-204ENST00000606752 C17orf50Q8WW18 174 aa17.32■□□□□ 0.36
USP6NL-204ENST00000606752 CXorf58Q96LI9 332 aa17.32■□□□□ 0.36
USP6NL-204ENST00000606752 TPSG1Q9NRR2 321 aa17.32■□□□□ 0.36
USP6NL-204ENST00000606752 AUP1Q9Y679 476 aa17.32■□□□□ 0.36
USP6NL-204ENST00000606752 CENPEQ02224 2701 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 CENPVL3A0A0U1RRI6 287 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 MOSP00540 346 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 IGKV1D-33P01593 117 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 IGKV1-33P01594 117 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 PAX6P26367 422 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 F2RL1P55085 397 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 RAB11AP62491 216 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 PJVKQ0ZLH3 352 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 PRSS8Q16651 343 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 MMD2Q8IY49 270 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 SLC24A4Q8NFF2 622 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 SCGB1C1Q8TD33 95 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 C1orf159Q96HA4 380 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 PARD6GQ9BYG4 376 aaPredicted RBP17.31■□□□□ 0.36
USP6NL-204ENST00000606752 MED9Q9NWA0 146 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 METTL1Q9UBP6 276 aaKnown RBP17.31■□□□□ 0.36
USP6NL-204ENST00000606752 A0A096LNT2 108 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 LRRC75BQ2VPJ9 315 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 ETV3LQ6ZN32 361 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 TMEM170AQ8WVE7 144 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 AJUBAQ96IF1 538 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 TMEM147Q9BVK8 224 aa17.31■□□□□ 0.36
USP6NL-204ENST00000606752 ABCA2Q9BZC7 2435 aa17.3■□□□□ 0.36
USP6NL-204ENST00000606752 ZNF705EA8MWA4 302 aaPredicted RBP17.3■□□□□ 0.36
USP6NL-204ENST00000606752 INS-IGF2F8WCM5 200 aa17.3■□□□□ 0.36
USP6NL-204ENST00000606752 NPFFO15130 113 aa17.3■□□□□ 0.36
USP6NL-204ENST00000606752 NPY1RP25929 384 aa17.3■□□□□ 0.36
USP6NL-204ENST00000606752 SAA4P35542 130 aa17.3■□□□□ 0.36
USP6NL-204ENST00000606752 ATP5IP56385 69 aaPredicted RBP17.3■□□□□ 0.36
USP6NL-204ENST00000606752 PPP1R27Q86WC6 154 aa17.3■□□□□ 0.36
USP6NL-204ENST00000606752 MBD6Q96DN6 1003 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms