RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 VSIG4Q9Y279 399 aa12.51□□□□□ -0.41
PPFIA3-213ENST00000602905 KCNIP3Q9Y2W7 256 aa12.51□□□□□ -0.41
PPFIA3-213ENST00000602905 TRGV3P03979 118 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 FGF2P09038 288 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 OR9G9P0C7N8 305 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 APELAP0DMC3 54 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 TPPP2P59282 170 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 DHODHQ02127 395 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 BAK1Q16611 211 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 C8orf86Q6ZUL3 223 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 RNASE11Q8TAA1 199 aaKnown RBP12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 MS4A10Q96PG2 267 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 TP53RKQ96S44 253 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 SLC25A21Q9BQT8 299 aaPredicted RBP12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 KLK15Q9H2R5 256 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 NAA60Q9H7X0 242 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 FKBP11Q9NYL4 201 aa12.5□□□□□ -0.41
PPFIA3-213ENST00000602905 SOX15O60248 233 aa12.49□□□□□ -0.41
PPFIA3-213ENST00000602905 AKR1C2P52895 323 aa12.49□□□□□ -0.41
PPFIA3-213ENST00000602905 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
PPFIA3-213ENST00000602905 THOC7Q6I9Y2 204 aaKnown RBP12.49□□□□□ -0.41
PPFIA3-213ENST00000602905 ZNF491Q8N8L2 437 aa12.49□□□□□ -0.41
PPFIA3-213ENST00000602905 OR4A16Q8NH70 328 aa12.49□□□□□ -0.41
PPFIA3-213ENST00000602905 C4orf3Q8WVX3 66 aa12.49□□□□□ -0.41
PPFIA3-213ENST00000602905 C7orf50Q9BRJ6 194 aaKnown RBP12.49□□□□□ -0.41
PPFIA3-213ENST00000602905 PRNDQ9UKY0 176 aa12.49□□□□□ -0.41
PPFIA3-213ENST00000602905 TRAV3A0A0B4J244 114 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 A0A0G2JLM5 398 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 C13orf42A0A1B0GVH6 325 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 LINC00854A0A1B0GVQ3 168 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 CRYM-AS1A6NIL9 109 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 RBMXL2O75526 392 aaKnown RBP12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 DHFRP00374 187 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 OR5AC1P0C628 307 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 ANXA3P12429 323 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 IL7P13232 177 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 AKR1C4P17516 323 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 CD33P20138 364 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 UCP1P25874 307 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 MYCNOSP40205 109 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 SP6Q3SY56 376 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 OR1L8Q8NGR8 309 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 MYOZ3Q8TDC0 251 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 CASTOR1Q8WTX7 329 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 RRNAD1Q96FB5 475 aaKnown RBP12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 SDHCQ99643 169 aaPredicted RBP12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 CCDC32Q9BV29 185 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 AKIP1Q9NQ31 210 aa12.48□□□□□ -0.41
PPFIA3-213ENST00000602905 TRRAPQ9Y4A5 3859 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 PIGBOS1A0A0B4J2F0 54 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 HMX3A6NHT5 357 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 TRAPPC2P0DI81 140 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 TRAPPC2BP0DI82 140 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 RBMS2Q15434 407 aaKnown RBP12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 ASPHD1Q5U4P2 390 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 C18orf65Q6ZTR6 163 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 TMED4Q7Z7H5 227 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 TTC9CQ8N5M4 171 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 SRSF8Q9BRL6 282 aaKnown RBP12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 QTRT1Q9BXR0 403 aaKnown RBP12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 WDR12Q9GZL7 423 aaKnown RBP12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 TMEM222Q9H0R3 208 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 ZNF257Q9Y2Q1 563 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 OR51B2Q9Y5P1 312 aa12.47□□□□□ -0.41
PPFIA3-213ENST00000602905 NPIPB5A8MRT5 1133 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 TEX22C9J3V5 150 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 CCL24O00175 119 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 CYB5BO43169 146 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 BRI3O95415 125 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 IGKV1-39P01597 117 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 IGKV1D-39P04432 117 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 OR2B8PP59922 312 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 HSD17B13Q7Z5P4 300 aaPredicted RBP12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 MRPL41Q8IXM3 137 aaKnown RBP12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 ADAD2Q8NCV1 583 aaKnown RBP12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 OR5B3Q8NH48 314 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 DPF1Q92782 380 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 USMG5Q96IX5 58 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 TMEM56Q96MV1 263 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 OR5B12Q96R08 314 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 HINT2Q9BX68 163 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 NSG2Q9Y328 171 aa12.46□□□□□ -0.41
PPFIA3-213ENST00000602905 PKD1L1Q8TDX9 2849 aa12.46□□□□□ -0.42
PPFIA3-213ENST00000602905 TEX50A0A1B0GTY4 177 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 C15orf61A6NNL5 157 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 CDS2O95674 445 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 DEFA4P12838 97 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 MYOD1P15172 320 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 PSMB6P28072 239 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 MECP2P51608 486 aaKnown RBP12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 RAB25P57735 213 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 RUNX1Q01196 453 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 KIAA0141Q14154 515 aaPredicted RBP12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 ZNF846Q147U1 533 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 FAM219AQ8IW50 185 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 RBPMSQ93062 196 aaKnown RBP12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 GALNT14Q96FL9 552 aa12.45□□□□□ -0.42
PPFIA3-213ENST00000602905 PDCD10Q9BUL8 212 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms