RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 A0A0G2JLM5 398 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 FAM240AA0A1B0GVK7 77 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 EEF1E1-BLOC1S5C9J1V9 151 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 OR7C1O76099 320 aaPredicted RBP4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 HRASP01112 189 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 TACSTD2P09758 323 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 RND3P61587 244 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 FUT5Q11128 374 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 ICAM4Q14773 271 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 MSMO1Q15800 293 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 FHL5Q5TD97 284 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 MRGPREQ86SM8 312 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 CDC20BQ86Y33 519 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 ZDHHC22Q8N966 263 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 APCDD1LQ8NCL9 501 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 FAM168AQ92567 244 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 AP1S3Q96PC3 154 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 PDCD1LG2Q9BQ51 273 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 VSIRQ9H7M9 311 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 MANBALQ9NQG1 85 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 C9orf118A6NHY6 69 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 F6UB75 175 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 H7C1H1 209 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 FFAR1O14842 300 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 BUB3O43684 328 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF253O75346 499 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 KRASP01116 189 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 HLA-DRB1P01911 266 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 LINC00869P0C866 280 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF728P0DKX0 622 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 CDK2P24941 298 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 EDNRAP25101 427 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 SEC11AP67812 179 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 IHHQ14623 411 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 MPV17L2Q567V2 206 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 OR10P1Q8NGE3 313 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 OR2K2Q8NGT1 345 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 RBMXL1Q96E39 390 aaKnown RBP4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 SDF2L1Q9HCN8 221 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 CMC2Q9NRP2 79 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 PRNDQ9UKY0 176 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 WASHC3Q9Y3C0 194 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 FANCMQ8IYD8 2048 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 BORCS7-ASMTA0A0B4J1R7 106 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 MUC21A0A0G2JKD1 596 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 MUC21A0A140T8X8 626 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 NCBP2LA6PVI3 153 aaKnown RBP4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 H7C1C5 153 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 K7N7A8 449 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 NUPR1O60356 82 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 NEURL1O76050 574 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 PRH1P02810 166 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 NTF3P20783 257 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 OPRM1P35372 400 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 PPP1CCP36873 323 aaKnown RBP4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 LAMTOR4Q0VGL1 99 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 MUC21Q5SSG8 566 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 ARTNQ5T4W7 220 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 OTPQ5XKR4 325 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 SBSNQ6UWP8 590 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 IGFL2Q6UWQ7 119 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 C16orf82Q7Z2V1 217 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 CA13Q8N1Q1 262 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 TMEM229BQ8NBD8 167 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 OR51T1Q8NGJ9 327 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 OR2G3Q8NGZ4 309 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 TMEM133Q9H2Q1 129 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 OARD1Q9Y530 152 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 PXMP4Q9Y6I8 212 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 TRAV9-2A0A087WT02 112 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 C7orf71A4D174 169 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 TMEM212A6NML5 194 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 LOC730098B7Z3J9 87 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 C17orf112F2Z3M2 114 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 H3BRM9 83 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 HSPB6O14558 160 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 CXCL13O43927 109 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 PTHLHP12272 177 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 CSRP1P21291 193 aaKnown RBP4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 APOC4P55056 127 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 MEF2CQ06413 473 aaPredicted RBP4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF726P1Q15940 193 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 ENTPD8Q5MY95 495 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF684Q5T5D7 378 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 LCN15Q6UWW0 184 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 SPIN2AQ99865 258 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 SPIN2BQ9BPZ2 258 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 SLC25A33Q9BSK2 321 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 PNRC2Q9NPJ4 139 aaKnown RBP4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 SPANXB1Q9NS25 103 aaPredicted RBP4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 CLCF1Q9UBD9 225 aa4.11□□□□□ -1.75
SPTBN1-206ENST00000602898 LOC107984640A0A0U1RRK4 108 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 CD300LBA8K4G0 201 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 J3QRE1 110 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 SLC25A6P12236 298 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 CCR2P41597 374 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF672Q499Z4 452 aaPredicted RBP4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 SP5Q6BEB4 398 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms