RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SP6Q3SY56 376 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 TMEM128Q5BJH2 165 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 TMEM65Q6PI78 240 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 H2BFWTQ7Z2G1 175 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 MYOZ3Q8TDC0 251 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 TMEM56Q96MV1 263 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 SRSF8Q9BRL6 282 aaKnown RBP10.85□□□□□ -0.67
RNF40-212ENST00000602784 COMMD5Q9GZQ3 224 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 FKBP11Q9NYL4 201 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 TMEM56-RWDD3S4R434 201 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 VWFP04275 2813 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 TRAV3A0A0B4J244 114 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 PIGBOS1A0A0B4J2F0 54 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 A0A1W2PN81 502 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 H3BUA1 57 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 SOX15O60248 233 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 UPK1BO75841 260 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 P0C879 139 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 AKR1C4P17516 323 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 CHRNA7P36544 502 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 RAB9AP51151 201 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 OR2B8PP59922 312 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 UBE2MP61081 183 aaKnown RBP10.84□□□□□ -0.67
RNF40-212ENST00000602784 RPL23AP62750 156 aaKnown RBP10.84□□□□□ -0.67
RNF40-212ENST00000602784 SUPT4H1P63272 117 aaKnown RBP10.84□□□□□ -0.67
RNF40-212ENST00000602784 TRIM16LQ309B1 348 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 PRR31Q5SQ13 230 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 ASPHD1Q5U4P2 390 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 SLC25A42Q86VD7 318 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 IL22RA2Q969J5 263 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 SLA2Q9H6Q3 261 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 TMEM14BQ9NUH8 114 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 PRNDQ9UKY0 176 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 PKD1L1Q8TDX9 2849 aa10.84□□□□□ -0.67
RNF40-212ENST00000602784 TEX22C9J3V5 150 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 E7EUB6 86 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 IGKV1-5P01602 117 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 RPLP1P05386 114 aaKnown RBP10.83□□□□□ -0.68
RNF40-212ENST00000602784 PF4V1P10720 104 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 ANXA3P12429 323 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 CDX1P47902 265 aaPredicted RBP10.83□□□□□ -0.68
RNF40-212ENST00000602784 SRPXP78539 464 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 KIAA0141Q14154 515 aaPredicted RBP10.83□□□□□ -0.68
RNF40-212ENST00000602784 TMEM187Q14656 261 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 C10orf55Q5SWW7 151 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 THOC7Q6I9Y2 204 aaKnown RBP10.83□□□□□ -0.68
RNF40-212ENST00000602784 TMED4Q7Z7H5 227 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 FAM219AQ8IW50 185 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 CENPSQ8N2Z9 138 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 TTC9CQ8N5M4 171 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 OR5B3Q8NH48 314 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 FAM110DQ8TAY7 271 aaPredicted RBP10.83□□□□□ -0.68
RNF40-212ENST00000602784 RBPMSQ93062 196 aaKnown RBP10.83□□□□□ -0.68
RNF40-212ENST00000602784 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 PHB2Q99623 299 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 KLK15Q9H2R5 256 aa10.83□□□□□ -0.68
RNF40-212ENST00000602784 WNK1Q9H4A3 2382 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 TEX50A0A1B0GTY4 177 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 A0A1B0GW64 132 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 C15orf61A6NNL5 157 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 NPIPB5A8MRT5 1133 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 OR9G9P0C7N8 305 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 AKR1C2P52895 323 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 ASAH1Q13510 395 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 NSUN5P1Q3KNT7 163 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 MZT2BQ6NZ67 158 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 HSD17B13Q7Z5P4 300 aaPredicted RBP10.82□□□□□ -0.68
RNF40-212ENST00000602784 ZNF695Q8IW36 515 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 SELENOHQ8IZQ5 122 aaKnown RBP10.82□□□□□ -0.68
RNF40-212ENST00000602784 ZNF491Q8N8L2 437 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 OR5T1Q8NG75 326 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 OR4F17Q8NGA8 305 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 OR1L8Q8NGR8 309 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 OR4A16Q8NH70 328 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 RRNAD1Q96FB5 475 aaKnown RBP10.82□□□□□ -0.68
RNF40-212ENST00000602784 OR4F4Q96R69 305 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 QTRT1Q9BXR0 403 aaKnown RBP10.82□□□□□ -0.68
RNF40-212ENST00000602784 NDUFA4L2Q9NRX3 87 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 ZNF257Q9Y2Q1 563 aa10.82□□□□□ -0.68
RNF40-212ENST00000602784 CGB1A6NKQ9 187 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 CRYGCP07315 174 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 TRAPPC2P0DI81 140 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 TRAPPC2BP0DI82 140 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 KHDC1LQ5JSQ8 128 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 HIST2H2BDQ6DRA6 164 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 LCNL1Q6ZST4 164 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 ZNF429Q86V71 674 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 LHFPL5Q8TAF8 219 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 LSM10Q969L4 123 aaKnown RBP10.81□□□□□ -0.68
RNF40-212ENST00000602784 FYTTD1Q96QD9 318 aaKnown RBP10.81□□□□□ -0.68
RNF40-212ENST00000602784 TBC1D24Q9ULP9 559 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 NSG2Q9Y328 171 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 OR51B2Q9Y5P1 312 aa10.81□□□□□ -0.68
RNF40-212ENST00000602784 MGAM2Q2M2H8 2515 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 A0A0B4J293 547 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 A0A1W2PRX2 142 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 HMX3A6NHT5 357 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 SFT2D2O95562 160 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 APELAP0DMC3 54 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 MYOD1P15172 320 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms