RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 OR2B11Q5JQS5 317 aa9.3□□□□□ -0.92
ZNF548-211ENST00000600927 MINOS1Q5TGZ0 78 aa9.3□□□□□ -0.92
ZNF548-211ENST00000600927 C9orf139Q6ZV77 190 aa9.3□□□□□ -0.92
ZNF548-211ENST00000600927 STX12Q86Y82 276 aa9.3□□□□□ -0.92
ZNF548-211ENST00000600927 TMEM158Q8WZ71 300 aa9.3□□□□□ -0.92
ZNF548-211ENST00000600927 FLYWCH2Q96CP2 140 aaKnown RBP9.3□□□□□ -0.92
ZNF548-211ENST00000600927 PSENENQ9NZ42 101 aa9.3□□□□□ -0.92
ZNF548-211ENST00000600927 PRNDQ9UKY0 176 aa9.3□□□□□ -0.92
ZNF548-211ENST00000600927 FOXA2Q9Y261 457 aaPredicted RBP9.3□□□□□ -0.92
ZNF548-211ENST00000600927 WASHC3Q9Y3C0 194 aa9.3□□□□□ -0.92
ZNF548-211ENST00000600927 MINOS1-NBL1R4GNA1 71 aa9.3□□□□□ -0.92
ZNF548-211ENST00000600927 FAM24AA6NFZ4 105 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 LEUTXA8MZ59 168 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 INS-IGF2F8WCM5 200 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 UPK2O00526 184 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 VENTXO95231 258 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 TMEM50AO95807 157 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 SEC11BP0C7V7 166 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 HTR1DP28221 377 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 HTR2BP41595 481 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 CAV2P51636 162 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 LINC00205P59089 165 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 HILS1P60008 231 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 HSPE1P61604 102 aaKnown RBP9.29□□□□□ -0.92
ZNF548-211ENST00000600927 ARF6P62330 175 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 HBG1P69891 147 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 HBG2P69892 147 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 SRSF2Q01130 221 aaKnown RBP9.29□□□□□ -0.92
ZNF548-211ENST00000600927 OR8H3Q8N146 312 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 OR4P4Q8NGL7 312 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 SPATA3Q8NHX4 192 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 PARD6GQ9BYG4 376 aaPredicted RBP9.29□□□□□ -0.92
ZNF548-211ENST00000600927 TMEM14BQ9NUH8 114 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 TMEM140Q9NV12 185 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 DPM3Q9P2X0 92 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 ONECUT1Q9UBC0 465 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 FBXL17Q9UF56 701 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 NUP50Q9UKX7 468 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 WNK2Q9Y3S1 2297 aa9.29□□□□□ -0.92
ZNF548-211ENST00000600927 C15orf61A6NNL5 157 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 ODF3BA8MYP8 253 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 SHOXO15266 292 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 RBMXL2O75526 392 aaKnown RBP9.28□□□□□ -0.92
ZNF548-211ENST00000600927 SPDEFO95238 335 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 OR9G9P0C7N8 305 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 IGHV4-38-2P0DP08 117 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 CD1BP29016 333 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 NHLH2Q02577 135 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 HABP2Q14520 560 aaPredicted RBP9.28□□□□□ -0.92
ZNF548-211ENST00000600927 IZUMO4Q1ZYL8 232 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 OR4A47Q6IF82 309 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 CCDC144NLQ6NUI1 221 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 TMEM14EPQ6UXP3 125 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 TEX45Q8NA69 505 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 OR1S2Q8NGQ3 325 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 OR5B3Q8NH48 314 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 DTD1Q8TEA8 209 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 RNF141Q8WVD5 230 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 CLCC1Q96S66 551 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 GINS3Q9BRX5 216 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 MRPL20Q9BYC9 149 aaKnown RBP9.28□□□□□ -0.92
ZNF548-211ENST00000600927 MAGT1Q9H0U3 335 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 SIRPDQ9H106 197 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 HIPK2Q9H2X6 1198 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 RBKSQ9H477 322 aa9.28□□□□□ -0.92
ZNF548-211ENST00000600927 TBL2Q9Y4P3 447 aaKnown RBP9.28□□□□□ -0.92
ZNF548-211ENST00000600927 RPS10-NUDT3A0A1W2PQS6 291 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 IGSF23A1L1A6 192 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 KBTBD11O94819 623 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 IFNA17P01571 189 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 OR8U8P0C7N1 319 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 S100A1P23297 94 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 RAB5CP51148 216 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 VMA21Q3ZAQ7 101 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 RPL7L1Q6DKI1 246 aaKnown RBP9.27□□□□□ -0.93
ZNF548-211ENST00000600927 ALKAL2Q6UX46 152 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 PDZD9Q8IXQ8 264 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 TMEM167AQ8TBQ9 72 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 RPEQ96AT9 228 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 PINX1Q96BK5 328 aaKnown RBP9.27□□□□□ -0.93
ZNF548-211ENST00000600927 GNPNAT1Q96EK6 184 aaPredicted RBP9.27□□□□□ -0.93
ZNF548-211ENST00000600927 SAT2Q96F10 170 aaPredicted RBP9.27□□□□□ -0.93
ZNF548-211ENST00000600927 TBX15Q96SF7 602 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 TSNAXQ99598 290 aaKnown RBP9.27□□□□□ -0.93
ZNF548-211ENST00000600927 GGACTQ9BVM4 153 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 MS4A7Q9GZW8 240 aaPredicted RBP9.27□□□□□ -0.93
ZNF548-211ENST00000600927 ESM1Q9NQ30 184 aa9.27□□□□□ -0.93
ZNF548-211ENST00000600927 STRAPQ9Y3F4 350 aaKnown RBP9.27□□□□□ -0.93
ZNF548-211ENST00000600927 TRAV40A0A0B4J280 105 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 IGHV1-3A0A0C4DH29 117 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 CEBPZOSA8MTT3 80 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 H7C2Y5 167 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 FGF16O43320 207 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 KCNAB3O43448 404 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 IGKV1-16P04430 117 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 MAS1LP35410 378 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 UBE2E1P51965 193 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 RPS16P62249 146 aaKnown RBP9.26□□□□□ -0.93
ZNF548-211ENST00000600927 TPTE2P1Q5T6R2 138 aa9.26□□□□□ -0.93
ZNF548-211ENST00000600927 PNKDQ8N490 385 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms