RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TOR2AQ5JU69 321 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 MARC2Q969Z3 335 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 PERPQ96FX8 193 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 TEX50A0A1B0GTY4 177 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 PMS2P5A8MQ11 134 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 AGPAT2O15120 278 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 SLC25A17O43808 307 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 FGF2P09038 288 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 OR8U8P0C7N1 319 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 LDLRAD2Q5SZI1 272 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 PUSL1Q8N0Z8 303 aaKnown RBP12.25□□□□□ -0.45
HIF3A-218ENST00000600383 OR11H6Q8NGC7 330 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 COMMD5Q9GZQ3 224 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 LOC105371267A0A1B0GV96 52 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 IFNA4P05014 189 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 RPL8P62917 257 aaKnown RBP12.25□□□□□ -0.45
HIF3A-218ENST00000600383 PDLIM3Q53GG5 364 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-218ENST00000600383 STPG2Q8N412 459 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 FAM213BQ8TBF2 198 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
HIF3A-218ENST00000600383 PIMREGQ9BSJ6 248 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 FKBP11Q9NYL4 201 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 DPM3Q9P2X0 92 aa12.25□□□□□ -0.45
HIF3A-218ENST00000600383 A0A1B0GV50 99 aa12.24□□□□□ -0.45
HIF3A-218ENST00000600383 IGLV2-23P01705 113 aa12.24□□□□□ -0.45
HIF3A-218ENST00000600383 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
HIF3A-218ENST00000600383 LRRC75BQ2VPJ9 315 aa12.24□□□□□ -0.45
HIF3A-218ENST00000600383 ETV3LQ6ZN32 361 aa12.24□□□□□ -0.45
HIF3A-218ENST00000600383 HSD17B13Q7Z5P4 300 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-218ENST00000600383 VSTM2AQ8TAG5 236 aa12.24□□□□□ -0.45
HIF3A-218ENST00000600383 PLEKHA3Q9HB20 300 aa12.24□□□□□ -0.45
HIF3A-218ENST00000600383 LY6LH3BQJ8 138 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 USF1P22415 310 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-218ENST00000600383 CNTFRP26992 372 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 VMA21Q3ZAQ7 101 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 HCP5Q6MZN7 132 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 CLEC2AQ6UVW9 174 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 C1orf122Q6ZSJ8 110 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 OR10W1Q8NGF6 305 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 WDR61Q9GZS3 305 aaKnown RBP12.23□□□□□ -0.45
HIF3A-218ENST00000600383 PARP11Q9NR21 331 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 UQCC1Q9NVA1 299 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 ZNF257Q9Y2Q1 563 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 CSMD2Q7Z408 3487 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 IGHV2-70DA0A0C4DH43 119 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 TOX4O94842 621 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 LY86O95711 162 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 LGALS7P47929 136 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 RAB5CP51148 216 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 PJVKQ0ZLH3 352 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 SSX2Q16385 188 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 ATP6V1FQ16864 119 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 TPTE2P1Q5T6R2 138 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 NARS2Q96I59 477 aaKnown RBP12.23□□□□□ -0.45
HIF3A-218ENST00000600383 TPSG1Q9NRR2 321 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 KPTNQ9Y664 436 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 PLXNB1O43157 2135 aa12.23□□□□□ -0.45
HIF3A-218ENST00000600383 SMCO3A2RU48 225 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 FAM157AC9JC47 383 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 E7EUB6 86 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 RNASEK-C17orf49H0YIS7 233 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 TIMM23O14925 209 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 CD24P25063 80 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 F2RL1P55085 397 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 RAB11AP62491 216 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 PRCDQ00LT1 54 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 PAX2Q02962 417 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 AKR1C8PQ5T2L2 129 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 SLC24A4Q8NFF2 622 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 TMEM170AQ8WVE7 144 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 TAF15Q92804 592 aaKnown RBP eCLIP12.22□□□□□ -0.45
HIF3A-218ENST00000600383 TMEM147Q9BVK8 224 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 ZNF430Q9H8G1 570 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-218ENST00000600383 IGHV4-61A0A0C4DH41 118 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 A8MXK9 166 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 UMAD1C9J7I0 102 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 FOXH1O75593 365 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 TSPAN15O95858 294 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 CA2P00918 260 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 CEACAM3P40198 252 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 LGALS4P56470 323 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 C10orf55Q5SWW7 151 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 BTNL8Q6UX41 500 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 OR5B3Q8NH48 314 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 TMEM167AQ8TBQ9 72 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 C10orf105Q8TEF2 133 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 LINC00052Q96N35 136 aa12.22□□□□□ -0.45
HIF3A-218ENST00000600383 A0A1W2PPI3 338 aa12.21□□□□□ -0.45
HIF3A-218ENST00000600383 TRIM77I1YAP6 450 aa12.21□□□□□ -0.45
HIF3A-218ENST00000600383 NPY1RP25929 384 aa12.21□□□□□ -0.45
HIF3A-218ENST00000600383 SRSF3P84103 164 aaKnown RBP12.21□□□□□ -0.45
HIF3A-218ENST00000600383 EIF4E3Q8N5X7 224 aaKnown RBP12.21□□□□□ -0.45
HIF3A-218ENST00000600383 KIR3DL3Q8N743 410 aa12.21□□□□□ -0.45
HIF3A-218ENST00000600383 SIRPDQ9H106 197 aa12.21□□□□□ -0.45
HIF3A-218ENST00000600383 TMEM231Q9H6L2 316 aa12.21□□□□□ -0.45
HIF3A-218ENST00000600383 CELSR2Q9HCU4 2923 aa12.21□□□□□ -0.46
HIF3A-218ENST00000600383 POLQO75417 2590 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 IGHV4-30-2A0A087WSY4 118 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 ODF3BA8MYP8 253 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms