RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 RNASE11Q8TAA1 199 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 ZNF431Q8TF32 576 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 ABHD5Q8WTS1 349 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 MITD1Q8WV92 249 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 RRNAD1Q96FB5 475 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 WNT10AQ9GZT5 417 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 SHPKQ9UHJ6 478 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 RNF114Q9Y508 228 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 A0A0B4J293 547 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 G3V318 75 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 AP4M1O00189 453 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 SNAPC5O75971 98 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 IGF1P05019 195 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 MAS1LP35410 378 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 NMSQ5H8A3 153 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 FOXRED2Q8IWF2 684 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 STPG2Q8N412 459 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 COQ8AQ8NI60 647 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 SRSF12Q8WXF0 261 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 LSM10Q969L4 123 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 WSB1Q9Y6I7 421 aa15.74■□□□□ 0.11
SHKBP1-222ENST00000600320 ATRQ13535 2644 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 C15orf61A6NNL5 157 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 HAX1O00165 279 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 ACTL6BO94805 426 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 HOXB5P09067 269 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 VDAC1P21796 283 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 RPL27AP46776 148 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 CRIP2P52943 208 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 OXA1LQ15070 435 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 C19orf54Q5BKX5 351 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 ASPHD1Q5U4P2 390 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 C10orf99Q6UWK7 81 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 FAM219AQ8IW50 185 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 SGMS2Q8NHU3 365 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 MDFIQ99750 246 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 QTRT1Q9BXR0 403 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 CACNG5Q9UF02 275 aa15.73■□□□□ 0.11
SHKBP1-222ENST00000600320 TET2Q6N021 2002 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 TEX50A0A1B0GTY4 177 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 DUXBA0A1W2PPF3 345 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 MSGN1A6NI15 193 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 ADAP1O75689 374 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 ECSCRQ19T08 205 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 GGNBP1Q5YKI7 109 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 KLHDC1Q8N7A1 406 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 LFNGQ8NES3 379 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 OR4A16Q8NH70 328 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 WIPF2Q8TF74 440 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 FYTTD1Q96QD9 318 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 TMEM14BQ9NUH8 114 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 ZNF580Q9UK33 172 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 PRNDQ9UKY0 176 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 OR51B2Q9Y5P1 312 aa15.72■□□□□ 0.11
SHKBP1-222ENST00000600320 TRAV41A0A0B4J266 112 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 A0A1B0GUS0 222 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 HMX3A6NHT5 357 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 TEX22C9J3V5 150 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 PRAF2O60831 178 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 DHFRP00374 187 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 FGF2P09038 288 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 APELAP0DMC3 54 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 KRTAP10-3P60369 221 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 CFHR3Q02985 330 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 UNQ5815/PRO19632Q6UWF5 114 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 ZNF329Q86UD4 541 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 C12orf45Q8N5I9 185 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 PHB2Q99623 299 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 COMMD5Q9GZQ3 224 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 FOXA2Q9Y261 457 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 COL6A5A8TX70 2615 aa15.71■□□□□ 0.11
SHKBP1-222ENST00000600320 MPTX1A8MV57 137 aa15.7■□□□□ 0.1
SHKBP1-222ENST00000600320 CHPT1Q8WUD6 406 aa15.7■□□□□ 0.1
SHKBP1-222ENST00000600320 GPN1Q9HCN4 374 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-222ENST00000600320 FBN1P35555 2871 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 PSMB11A5LHX3 300 aa15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 SNRPGP15A8MWD9 76 aa15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 ST8SIA3O43173 380 aa15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 PPIFP30405 207 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 TATDN3Q17R31 274 aa15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 HIST2H2BDQ6DRA6 164 aa15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 CENPVQ7Z7K6 275 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 UXS1Q8NBZ7 420 aa15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 OR1L8Q8NGR8 309 aa15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 TMED3Q9Y3Q3 217 aa15.69■□□□□ 0.1
SHKBP1-222ENST00000600320 PIGBOS1A0A0B4J2F0 54 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 C7orf66A4D0T2 115 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 CCSO14618 274 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 SOX15O60248 233 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 RBMXL2O75526 392 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 SULT1A3P0DMM9 295 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 SULT1A4P0DMN0 295 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 AREGP15514 252 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 SMCO1Q147U7 214 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 C2orf68Q2NKX9 166 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 AARDQ4LEZ3 155 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 SPINK9Q5DT21 86 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 ZNF429Q86V71 674 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 OR10W1Q8NGF6 305 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 OR5B3Q8NH48 314 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms