RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 NUPR2A6NF83 97 aa12.85□□□□□ -0.35
SMG9-210ENST00000600097 NDUFB8O95169 186 aa12.85□□□□□ -0.35
SMG9-210ENST00000600097 IGHV3-23P01764 117 aa12.85□□□□□ -0.35
SMG9-210ENST00000600097 PSMB6P28072 239 aa12.85□□□□□ -0.35
SMG9-210ENST00000600097 RPL5P46777 297 aaKnown RBP12.85□□□□□ -0.35
SMG9-210ENST00000600097 NCS1P62166 190 aa12.85□□□□□ -0.35
SMG9-210ENST00000600097 PUSL1Q8N0Z8 303 aaKnown RBP12.85□□□□□ -0.35
SMG9-210ENST00000600097 MARC2Q969Z3 335 aa12.85□□□□□ -0.35
SMG9-210ENST00000600097 SLC25A46Q96AG3 418 aa12.85□□□□□ -0.35
SMG9-210ENST00000600097 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
SMG9-210ENST00000600097 RHBDL2Q9NX52 303 aa12.85□□□□□ -0.35
SMG9-210ENST00000600097 TRBV7-1A0A0A6YYK4 115 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 E7EUB6 86 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 SCAF4O95104 1147 aaKnown RBP12.84□□□□□ -0.35
SMG9-210ENST00000600097 GABARAPO95166 117 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 IGLV2-14P01704 120 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 NFYAP23511 347 aaPredicted RBP12.84□□□□□ -0.35
SMG9-210ENST00000600097 TM4SF20Q53R12 229 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 C19orf35Q6ZS72 473 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 WFDC3Q8IUB2 231 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 TCTEX1D2Q8WW35 142 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 CXorf58Q96LI9 332 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 TP53TG1Q9Y2A0 90 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 SELENOKQ9Y6D0 94 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 S4R3C0 116 aa12.84□□□□□ -0.35
SMG9-210ENST00000600097 PLECQ15149 4684 aaKnown RBP12.83□□□□□ -0.35
SMG9-210ENST00000600097 A0A0A6YYH2 397 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 A0A1B0GW64 132 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 A6NJ64 397 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 HRASP01112 189 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 DEFA4P12838 97 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 AREGP15514 252 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 CTRB1P17538 263 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 RORCP51449 518 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 RPL8P62917 257 aaKnown RBP12.83□□□□□ -0.36
SMG9-210ENST00000600097 TNFRSF9Q07011 255 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 PMS2P11Q13670 270 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 CTF1Q16619 201 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 CDNFQ49AH0 187 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 CTRB2Q6GPI1 263 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 CNIH2Q6PI25 160 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 BTNL8Q6UX41 500 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 RBPMS2Q6ZRY4 209 aaKnown RBP12.83□□□□□ -0.36
SMG9-210ENST00000600097 OR1L6Q8NGR2 347 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 DIABLOQ9NR28 239 aa12.83□□□□□ -0.36
SMG9-210ENST00000600097 ELF5Q9UKW6 265 aaPredicted RBP12.83□□□□□ -0.36
SMG9-210ENST00000600097 IGKV1D-13A0A0B4J2D9 117 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 CLEC3BP05452 202 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 C8orf88P0DMB2 117 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 IGKV1-13P0DP09 117 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 BMI1P35226 326 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 APOC4P55056 127 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 ELLP55199 621 aaPredicted RBP12.82□□□□□ -0.36
SMG9-210ENST00000600097 HACD4Q5VWC8 232 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 ZNF66Q6ZN08 573 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 Q6ZWC4 215 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 SLC38A6Q8IZM9 456 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 MFSD4AQ8N468 514 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 OR5H6Q8NGV6 325 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 S100A16Q96FQ6 103 aaKnown RBP12.82□□□□□ -0.36
SMG9-210ENST00000600097 AIFM2Q9BRQ8 373 aa12.82□□□□□ -0.36
SMG9-210ENST00000600097 NAA50Q9GZZ1 169 aaKnown RBP12.82□□□□□ -0.36
SMG9-210ENST00000600097 MRPL27Q9P0M9 148 aaKnown RBP12.82□□□□□ -0.36
SMG9-210ENST00000600097 ALMS1Q8TCU4 4167 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 IGLV11-55A0A075B6I3 123 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 A0A0J9YWU9 116 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 NOL3O60936 208 aaKnown RBP12.81□□□□□ -0.36
SMG9-210ENST00000600097 ATF4P18848 351 aaPredicted RBP12.81□□□□□ -0.36
SMG9-210ENST00000600097 TMBIM6P55061 237 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 EIF4EBP1Q13541 118 aaPredicted RBP12.81□□□□□ -0.36
SMG9-210ENST00000600097 UBE2NLQ5JXB2 153 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 CEMP1Q6PRD7 247 aaPredicted RBP12.81□□□□□ -0.36
SMG9-210ENST00000600097 CLVS1Q8IUQ0 354 aaPredicted RBP12.81□□□□□ -0.36
SMG9-210ENST00000600097 OR4A5Q8NH83 315 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 RAB2BQ8WUD1 216 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 BCL7BQ9BQE9 202 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 TAS2R8Q9NYW2 309 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 UFC1Q9Y3C8 167 aa12.81□□□□□ -0.36
SMG9-210ENST00000600097 UBE2CO00762 179 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 SPRY2O43597 315 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 MYOD1P15172 320 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 HLA-GP17693 338 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 BRWD1-AS2P59051 145 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 ZNF585BQ52M93 769 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 MZT2AQ6P582 158 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 UNQ9165/PRO28630Q6UXU0 137 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 SSX9Q7RTT3 188 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 LYG2Q86SG7 212 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 OR2C3Q8N628 320 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 AP3S1Q92572 193 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 SLC25A38Q96DW6 304 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 CMTM3Q96MX0 182 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 SPAG8Q99932 426 aaPredicted RBP12.8□□□□□ -0.36
SMG9-210ENST00000600097 BET1LQ9NYM9 111 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 THYN1Q9P016 225 aa12.8□□□□□ -0.36
SMG9-210ENST00000600097 KLK5Q9Y337 293 aaPredicted RBP12.8□□□□□ -0.36
SMG9-210ENST00000600097 MFSD2BA6NFX1 497 aa12.79□□□□□ -0.36
SMG9-210ENST00000600097 REG1AP05451 166 aa12.79□□□□□ -0.36
SMG9-210ENST00000600097 GNG2P59768 71 aa12.79□□□□□ -0.36
SMG9-210ENST00000600097 PLET1Q6UQ28 207 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms