RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PGAM2P15259 253 aa14.32□□□□□ -0.12
PNKP-213ENST00000599543 RPA2P15927 270 aa14.32□□□□□ -0.12
PNKP-213ENST00000599543 SYNJ2BPP57105 145 aa14.32□□□□□ -0.12
PNKP-213ENST00000599543 KLF5Q13887 457 aaPredicted RBP14.32□□□□□ -0.12
PNKP-213ENST00000599543 PRSS8Q16651 343 aa14.32□□□□□ -0.12
PNKP-213ENST00000599543 SSX9Q7RTT3 188 aa14.32□□□□□ -0.12
PNKP-213ENST00000599543 SGPP2Q8IWX5 399 aa14.32□□□□□ -0.12
PNKP-213ENST00000599543 OR4C16Q8NGL9 310 aa14.32□□□□□ -0.12
PNKP-213ENST00000599543 OSR1Q8TAX0 266 aaPredicted RBP14.32□□□□□ -0.12
PNKP-213ENST00000599543 PEF1Q9UBV8 284 aaKnown RBP14.32□□□□□ -0.12
PNKP-213ENST00000599543 GPR31O00270 319 aa14.31□□□□□ -0.12
PNKP-213ENST00000599543 CREBL2O60519 120 aaPredicted RBP14.31□□□□□ -0.12
PNKP-213ENST00000599543 ZNF735P0CB33 412 aa14.31□□□□□ -0.12
PNKP-213ENST00000599543 MSMO1Q15800 293 aa14.31□□□□□ -0.12
PNKP-213ENST00000599543 TATDN3Q17R31 274 aa14.31□□□□□ -0.12
PNKP-213ENST00000599543 MRGPRG-AS1Q2M3A8 158 aa14.31□□□□□ -0.12
PNKP-213ENST00000599543 ZNF343Q6P1L6 599 aa14.31□□□□□ -0.12
PNKP-213ENST00000599543 ZBTB34Q8NCN2 500 aa14.31□□□□□ -0.12
PNKP-213ENST00000599543 OR4S2Q8NH73 311 aa14.31□□□□□ -0.12
PNKP-213ENST00000599543 SRSF12Q8WXF0 261 aaKnown RBP14.31□□□□□ -0.12
PNKP-213ENST00000599543 THAP7Q9BT49 309 aaPredicted RBP14.31□□□□□ -0.12
PNKP-213ENST00000599543 ANKRD20A5PA0PJZ0 165 aa14.3□□□□□ -0.12
PNKP-213ENST00000599543 A6NHS1 94 aa14.3□□□□□ -0.12
PNKP-213ENST00000599543 H0Y980 276 aa14.3□□□□□ -0.12
PNKP-213ENST00000599543 ACTL6BO94805 426 aa14.3□□□□□ -0.12
PNKP-213ENST00000599543 OR9G9P0C7N8 305 aa14.3□□□□□ -0.12
PNKP-213ENST00000599543 CATR1Q13166 79 aa14.3□□□□□ -0.12
PNKP-213ENST00000599543 RPEL1Q2QD12 228 aa14.3□□□□□ -0.12
PNKP-213ENST00000599543 ADAD2Q8NCV1 583 aaKnown RBP14.3□□□□□ -0.12
PNKP-213ENST00000599543 RABL2AQ9UBK7 228 aaPredicted RBP14.3□□□□□ -0.12
PNKP-213ENST00000599543 RABL2BQ9UNT1 228 aa14.3□□□□□ -0.12
PNKP-213ENST00000599543 S1PR2O95136 353 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 TRBV12-3P01733 135 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 AKAIN1P0CW23 69 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 TBPP20226 339 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 SSBP1Q04837 148 aaKnown RBP14.29□□□□□ -0.12
PNKP-213ENST00000599543 C10orf55Q5SWW7 151 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 CASC10Q5T4H9 136 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 LHFPL1Q86WI0 220 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 Q8N1Y9 231 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 Q8N402 240 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 ARRDC1Q8N5I2 433 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 MARCH1Q8TCQ1 289 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 TRIM63Q969Q1 353 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 MRGPRFQ96AM1 343 aa14.29□□□□□ -0.12
PNKP-213ENST00000599543 ZNF430Q9H8G1 570 aaPredicted RBP14.29□□□□□ -0.12
PNKP-213ENST00000599543 FAM223BA6NKX1 122 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 OR2A4O95047 310 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 MYOD1P15172 320 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 RHOGP84095 191 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 CNPY1Q3B7I2 92 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 SPANXN2Q5MJ10 180 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 LCN12Q6JVE5 192 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 IL34Q6ZMJ4 242 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 TBC1D26Q86UD7 250 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 GTSCR1Q86UQ5 136 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 FAM223AQ8IWN6 122 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 OR51S1Q8NGJ8 323 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 SPIN2AQ99865 258 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 SPIN2BQ9BPZ2 258 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 TM2D3Q9BRN9 247 aa14.28□□□□□ -0.12
PNKP-213ENST00000599543 A8MZ25 164 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 DISC1C4P0D8 188 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 RBMXL2O75526 392 aaKnown RBP14.27□□□□□ -0.13
PNKP-213ENST00000599543 KIR2DS2P43631 304 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 LPAR6P43657 344 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 UCP3P55916 312 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 MEF2DQ14814 521 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 MMD2Q8IY49 270 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 CMTM1Q8IZ96 169 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 SLC38A6Q8IZM9 456 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 OR13C8Q8NGS7 320 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 TERB2Q8NHR7 220 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 SRRQ9GZT4 340 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 PALMDQ9NP74 551 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 AKIP1Q9NQ31 210 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 C19orf73Q9NVV2 129 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 MCUBQ9NWR8 336 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 PEMTQ9UBM1 199 aa14.27□□□□□ -0.13
PNKP-213ENST00000599543 PRH1P02810 166 aa14.26□□□□□ -0.13
PNKP-213ENST00000599543 LYL1P12980 280 aa14.26□□□□□ -0.13
PNKP-213ENST00000599543 ATP5G2Q06055 141 aa14.26□□□□□ -0.13
PNKP-213ENST00000599543 EXOSC2Q13868 293 aaKnown RBP14.26□□□□□ -0.13
PNKP-213ENST00000599543 ZNF585BQ52M93 769 aa14.26□□□□□ -0.13
PNKP-213ENST00000599543 LPCAT3Q6P1A2 487 aa14.26□□□□□ -0.13
PNKP-213ENST00000599543 BORCS5Q969J3 196 aa14.26□□□□□ -0.13
PNKP-213ENST00000599543 CITED4Q96RK1 184 aa14.26□□□□□ -0.13
PNKP-213ENST00000599543 SLC2A9Q9NRM0 540 aa14.26□□□□□ -0.13
PNKP-213ENST00000599543 SIGLEC8Q9NYZ4 499 aa14.26□□□□□ -0.13
PNKP-213ENST00000599543 TRAV3A0A0B4J244 114 aa14.25□□□□□ -0.13
PNKP-213ENST00000599543 LINC00854A0A1B0GVQ3 168 aa14.25□□□□□ -0.13
PNKP-213ENST00000599543 CSN3P07498 182 aa14.25□□□□□ -0.13
PNKP-213ENST00000599543 ETV6P41212 452 aa14.25□□□□□ -0.13
PNKP-213ENST00000599543 KLF9Q13886 244 aaPredicted RBP14.25□□□□□ -0.13
PNKP-213ENST00000599543 BAK1Q16611 211 aa14.25□□□□□ -0.13
PNKP-213ENST00000599543 PUSL1Q8N0Z8 303 aaKnown RBP14.25□□□□□ -0.13
PNKP-213ENST00000599543 HRASLSQ9HDD0 168 aa14.25□□□□□ -0.13
PNKP-213ENST00000599543 CSMD3Q7Z407 3707 aa14.25□□□□□ -0.13
PNKP-213ENST00000599543 TRBV9A0A0B4J1U6 114 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 KBTBD11O94819 623 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms