RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 ZNF831Q5JPB2 1677 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 MSGN1A6NI15 193 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 IFNL4K9M1U5 179 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 PF4P02776 101 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 ZNF324BQ6AW86 544 aaPredicted RBP10.05□□□□□ -0.8
SCN8A-208ENST00000599343 WDYHV1Q96HA8 205 aa10.05□□□□□ -0.8
SCN8A-208ENST00000599343 PEX7O00628 323 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 ASIPP42127 132 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 ATP5G3P48201 142 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 PAPPA-AS1Q5QFB9 102 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 SAPCD1Q5SSQ6 148 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 ADAMTSL3P82987 1691 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 ICE1Q9Y2F5 2266 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 SMAD7O15105 426 aaKnown RBP10.04□□□□□ -0.8
SCN8A-208ENST00000599343 C1QL2Q7Z5L3 287 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 LINC01560Q8TB33 94 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 TMEM54Q969K7 222 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 SCARF2Q96GP6 870 aaPredicted RBP10.04□□□□□ -0.8
SCN8A-208ENST00000599343 ZNF638Q14966 1978 aaKnown RBP10.04□□□□□ -0.8
SCN8A-208ENST00000599343 NPIPB4C9JG80 1138 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 FGF5P12034 268 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 UCP3P55916 312 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 ZP1P60852 638 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 TBR1Q16650 682 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 ARAP2Q8WZ64 1704 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 IGKV3D-20A0A0C4DH25 116 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 PROB1E7EW31 1015 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 CA1P00915 261 aaPredicted RBP10.04□□□□□ -0.8
SCN8A-208ENST00000599343 CA7P43166 264 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 UCNP55089 124 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 LINC01590Q5TEZ4 76 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 PSMG3Q9BT73 122 aaPredicted RBP10.04□□□□□ -0.8
SCN8A-208ENST00000599343 FBXL15Q9H469 300 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 SYNGR3O43761 229 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 NBEAP1P0C6P0 100 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 RAB9AP51151 201 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 FAM201AQ5SY85 155 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 FHL5Q5TD97 284 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 CCL19Q99731 98 aa10.04□□□□□ -0.8
SCN8A-208ENST00000599343 RNASE4P34096 147 aaKnown RBP10.03□□□□□ -0.8
SCN8A-208ENST00000599343 MTURNQ8N3F0 131 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 GATAD1Q8WUU5 269 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 ITLN2Q8WWU7 325 aaPredicted RBP10.03□□□□□ -0.8
SCN8A-208ENST00000599343 FOCADQ5VW36 1801 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 ZNF646O15015 1829 aaPredicted RBP10.03□□□□□ -0.8
SCN8A-208ENST00000599343 FAM186AA6NE01 2351 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 IFI27L2Q9H2X8 130 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 SPCS1Q9Y6A9 102 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 A0A1B0GV72 72 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 IGHMP01871 453 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 HOXA5P20719 270 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 TMPRSS3P57727 454 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 OR5AN1Q8NGI8 311 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 RNASEH2CQ8TDP1 164 aaKnown RBP10.03□□□□□ -0.8
SCN8A-208ENST00000599343 DUX3Q96PT4 197 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 C2orf88Q9BSF0 95 aa10.03□□□□□ -0.8
SCN8A-208ENST00000599343 C17orf98A8MV24 154 aa10.02□□□□□ -0.8
SCN8A-208ENST00000599343 VENTXO95231 258 aa10.02□□□□□ -0.8
SCN8A-208ENST00000599343 CD8AP01732 235 aa10.02□□□□□ -0.8
SCN8A-208ENST00000599343 PDLIM4P50479 330 aa10.02□□□□□ -0.8
SCN8A-208ENST00000599343 AICDAQ9GZX7 198 aa10.02□□□□□ -0.8
SCN8A-208ENST00000599343 GATA2P23769 480 aaPredicted RBP10.02□□□□□ -0.81
SCN8A-208ENST00000599343 NIT1Q86X76 327 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 STAG3L3P0CL85 134 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 COX5BP10606 129 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 EGR4Q05215 589 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 Q5PR19 223 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 MIR17HGQ75NE6 70 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 GSN-AS1Q9NRJ2 163 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 TRAV12-3A0A0B4J271 114 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 TRBV7-9A0A0J9YWB2 115 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 TMEM250H0YL14 139 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 PCOLCEQ15113 449 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 RPP21Q9H633 154 aaKnown RBP10.02□□□□□ -0.81
SCN8A-208ENST00000599343 FBXL7Q9UJT9 491 aa10.02□□□□□ -0.81
SCN8A-208ENST00000599343 IGKV1D-33P01593 117 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 IGKV1-33P01594 117 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 GPX4P36969 197 aaPredicted RBP10.01□□□□□ -0.81
SCN8A-208ENST00000599343 NEUROG1Q92886 237 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 TMEM74BQ9NUR3 256 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 SRP19P09132 144 aaKnown RBP10.01□□□□□ -0.81
SCN8A-208ENST00000599343 GPR183P32249 361 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 ACP7Q6ZNF0 438 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 SDHCQ99643 169 aaPredicted RBP10.01□□□□□ -0.81
SCN8A-208ENST00000599343 ABCA3Q99758 1704 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.01□□□□□ -0.81
SCN8A-208ENST00000599343 PQLC2LA1A4F0 135 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 C12orf77C9JDV5 145 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 RAMP1O60894 148 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 RIPPLY2Q5TAB7 128 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 FAM71F2Q6NXP2 309 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 SPAG8Q99932 426 aaPredicted RBP10.01□□□□□ -0.81
SCN8A-208ENST00000599343 SEMA5BQ9P283 1151 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 IGHV4-39P01824 125 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 HOXB1P14653 301 aaPredicted RBP10.01□□□□□ -0.81
SCN8A-208ENST00000599343 LAIR2Q6ISS4 152 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 TCF23Q7RTU1 214 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 A0A1B0GUT8 65 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms