RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 C7orf66A4D0T2 115 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 SNRPGP15A8MWD9 76 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 HPRT1P00492 218 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 IGKV1-39P01597 117 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 HLA-AP01891 365 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 IGKV1-16P04430 117 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 IGKV1D-39P04432 117 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 RPA2P15927 270 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 LPAR6P43657 344 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 RTL8BQ17RB0 113 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 ANKRD55Q3KP44 614 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 C4orf46Q504U0 113 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 OR2B11Q5JQS5 317 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 Q6ZNX1 250 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 LRTM2Q8N967 370 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 OR52B4Q8NGK2 314 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 LHFPL5Q8TAF8 219 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 ZNF431Q8TF32 576 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 SEC22CQ9BRL7 303 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 SLC25A33Q9BSK2 321 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 PLEKHA2Q9HB19 425 aa10.83□□□□□ -0.68
SHKBP1-218ENST00000598907 A0A0B4J2A0 478 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 CCL24O00175 119 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 MOSP00540 346 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 IGKV1D-33P01593 117 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 IGKV1-33P01594 117 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 ANXA3P12429 323 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 VAMP1P23763 118 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 POU2AF1Q16633 256 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 ZNF695Q8IW36 515 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 OR2T10Q8NGZ9 312 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 OSR1Q8TAX0 266 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 MITD1Q8WV92 249 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 IL22RA2Q969J5 263 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 FLYWCH2Q96CP2 140 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 RITA1Q96K30 269 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 COMMD9Q9P000 198 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 SHPKQ9UHJ6 478 aa10.82□□□□□ -0.68
SHKBP1-218ENST00000598907 DBX1A6NMT0 343 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 H7C2Y5 167 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 S1PR2O95136 353 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 CRYZL1O95825 349 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 IGLV2-23P01705 113 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 SERPINE2P07093 398 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 IL6RP08887 468 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 FAM106CPP0CH98 169 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 LGALS7P47929 136 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 SRPXP78539 464 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 C16orf82Q7Z2V1 217 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 SELENOHQ8IZQ5 122 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 CADM3Q8N126 398 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 SEC22AQ96IW7 307 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 GPN1Q9HCN4 374 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 PLSCR3Q9NRY6 295 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 PRR13Q9NZ81 148 aa10.81□□□□□ -0.68
SHKBP1-218ENST00000598907 P0C879 139 aa10.8□□□□□ -0.68
SHKBP1-218ENST00000598907 CBX3Q13185 183 aa10.8□□□□□ -0.68
SHKBP1-218ENST00000598907 LGI3Q8N145 548 aa10.8□□□□□ -0.68
SHKBP1-218ENST00000598907 NPBQ8NG41 125 aa10.8□□□□□ -0.68
SHKBP1-218ENST00000598907 CASTOR1Q8WTX7 329 aa10.8□□□□□ -0.68
SHKBP1-218ENST00000598907 RBPMSQ93062 196 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-218ENST00000598907 NOL4LQ96MY1 436 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-218ENST00000598907 ALG5Q9Y673 324 aa10.8□□□□□ -0.68
SHKBP1-218ENST00000598907 HECTD4Q9Y4D8 3996 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 DUXBA0A1W2PPF3 345 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 SHOXO15266 292 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 CREBL2O60519 120 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 NDUFA3O95167 84 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 HRASP01112 189 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 IGKV1-5P01602 117 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 AMY1AP04745 511 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 CRYGBP07316 175 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 NQO2P16083 231 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 TMEM11P17152 192 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 F2RL1P55085 397 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 RPS16P62249 146 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 TMEM268Q5VZI3 342 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 PUSL1Q8N0Z8 303 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 C12orf45Q8N5I9 185 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 OR8H1Q8NGG4 311 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 COQ8AQ8NI60 647 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 HARBI1Q96MB7 349 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 RBM14Q96PK6 669 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 PHB2Q99623 299 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 TM2D3Q9BRN9 247 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 AIFM2Q9BRQ8 373 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 OR51J1Q9H342 316 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 ZFP57Q9NU63 452 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 LINC00527Q9UJ94 153 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 ABCA13Q86UQ4 5058 aa10.79□□□□□ -0.68
SHKBP1-218ENST00000598907 PIGBOS1A0A0B4J2F0 54 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 MARCH11A6NNE9 402 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 OR2F2O95006 317 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 SPDEFO95238 335 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 HLA-GP17693 338 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 CNTFRP26992 372 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms