RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 A0A0G2JRQ6 117 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 TEX50A0A1B0GTY4 177 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 NUDT19A8MXV4 375 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 I3L521 148 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 PLA2G10O15496 165 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 P0C879 139 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 AREGP15514 252 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 UCP1P25874 307 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 S100GP29377 79 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 MAS1LP35410 378 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 OR2B8PP59922 312 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 ZNF45Q02386 682 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 TMEM65Q6PI78 240 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 OR5M8Q8NGP6 311 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 GLYATL2Q8WU03 294 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 FYTTD1Q96QD9 318 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 OR4F4Q96R69 305 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 P2RX4Q99571 388 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 AIFM2Q9BRQ8 373 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 NAA60Q9H7X0 242 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 BATF3Q9NR55 127 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 PRR13Q9NZ81 148 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 SCP2D1Q9UJQ7 156 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 MGAM2Q2M2H8 2515 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 WNK1Q9H4A3 2382 aa11.02□□□□□ -0.65
SHKBP1-217ENST00000598558 CRYM-AS1A6NIL9 109 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 ACTL6BO94805 426 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 IGHV3-11P01762 117 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 OR5AC1P0C628 307 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 BTCP35070 178 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 ECI1P42126 302 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 CCR6P51684 374 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 AP3S2P59780 193 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 SUPT4H1P63272 117 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 CADM3Q8N126 398 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 TTC9CQ8N5M4 171 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 CCDC71LQ8N9Z2 235 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 WFDC9Q8NEX5 89 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 OR10W1Q8NGF6 305 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 UBE2E2Q96LR5 201 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 PHB2Q99623 299 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 PTTG2Q9NZH5 202 aa11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 C14orf166Q9Y224 244 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-217ENST00000598558 TEX13DA0A0J9YY54 714 aaPredicted RBP11□□□□□ -0.65
SHKBP1-217ENST00000598558 CREBL2O60519 120 aaPredicted RBP11□□□□□ -0.65
SHKBP1-217ENST00000598558 TRGV3P03979 118 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 REG1AP05451 166 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 SERPINE2P07093 398 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 TPPP2P59282 170 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 ERVK-16P61578 105 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 Q6ZRM9 215 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 MRPL41Q8IXM3 137 aaKnown RBP11□□□□□ -0.65
SHKBP1-217ENST00000598558 LINC00482Q8N8I6 264 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 C4orf3Q8WVX3 66 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 TMEM68Q96MH6 324 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 SPIN2AQ99865 258 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 SPIN2BQ9BPZ2 258 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 TMEM222Q9H0R3 208 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 ZNF355PQ9NSJ1 428 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 TNCP24821 2201 aa11□□□□□ -0.65
SHKBP1-217ENST00000598558 NBEAL1Q6ZS30 2694 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 A0A0B4J293 547 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 IGLC7A0M8Q6 106 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 CCL24O00175 119 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 BRI3O95415 125 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 CDS2O95674 445 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 AKR1C4P17516 323 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 FAUP35544 74 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 MYCNOSP40205 109 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 RUNX1Q01196 453 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 TMEM187Q14656 261 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 TRIQKQ629K1 86 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 LINC00299Q6ZSB3 139 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 SELENOHQ8IZQ5 122 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 FANCD2OSQ96PS1 177 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 NDUFA4L2Q9NRX3 87 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 TMEM14BQ9NUH8 114 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 COA4Q9NYJ1 87 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 FLVCR2Q9UPI3 526 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 DMRT1Q9Y5R6 373 aa10.99□□□□□ -0.65
SHKBP1-217ENST00000598558 TRBV9A0A0B4J1U6 114 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 G3V4G9 280 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 H3BUA1 57 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 CRYGCP07315 174 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 CTRB1P17538 263 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 PSMB6P28072 239 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 WT1-ASQ06250 92 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 TRIM16LQ309B1 348 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 CTRB2Q6GPI1 263 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 H2BFWTQ7Z2G1 175 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 OR11H1Q8NG94 326 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 DEDD2Q8WXF8 326 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 GALNT14Q96FL9 552 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 QTRT1Q9BXR0 403 aaKnown RBP10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 COMMD5Q9GZQ3 224 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 SLA2Q9H6Q3 261 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 OR51B2Q9Y5P1 312 aa10.98□□□□□ -0.65
SHKBP1-217ENST00000598558 C15orf61A6NNL5 157 aa10.97□□□□□ -0.65
SHKBP1-217ENST00000598558 NPIPB5A8MRT5 1133 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms