RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 CA2P00918 260 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 GZMHP20718 246 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 IGFBPL1Q8WX77 278 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 TACC2O95359 2948 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 LYNX1G3V0Z9 82 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 TNRC18O15417 2968 aaPredicted RBP10.31□□□□□ -0.76
USHBP1-207ENST00000597928 LYNX1P0DP58 116 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 DPPA3Q6W0C5 159 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 ZNF600Q6ZNG1 722 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 OR10G8Q8NGN5 311 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 OR1P1Q8NH06 330 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 VN1R17PQ8TDU5 208 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 HIST1H2BLQ99880 126 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 SEPSECSQ9HD40 501 aaKnown RBP10.31□□□□□ -0.76
USHBP1-207ENST00000597928 RPL31P62899 125 aaKnown RBP10.31□□□□□ -0.76
USHBP1-207ENST00000597928 ACSF3Q4G176 576 aaPredicted RBP10.31□□□□□ -0.76
USHBP1-207ENST00000597928 PQLC2Q6ZP29 291 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 HIST3H2BBQ8N257 126 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 ZNF114Q8NC26 417 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 LURAP1Q96LR2 239 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 SCRT1Q9BWW7 348 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 LINC00596Q86U02 117 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 MDS2Q8NDY4 140 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 OR51B2Q9Y5P1 312 aa10.31□□□□□ -0.76
USHBP1-207ENST00000597928 CD82P27701 267 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 HOXA6P31267 233 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 RANP62826 216 aaKnown RBP10.3□□□□□ -0.76
USHBP1-207ENST00000597928 GNB2P62879 340 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 MIR17HGQ75NE6 70 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 SLC24A4Q8NFF2 622 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 HARBI1Q96MB7 349 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 PITPNC1Q9UKF7 332 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 HRASP01112 189 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 ZNF295-AS1Q8N0V1 137 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 FAM208BQ5VWN6 2430 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 IGLV2-14P01704 120 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 GNG4P50150 75 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 ZNF134P52741 427 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 TIGITQ495A1 244 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 TRAT1Q6PIZ9 186 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 STPG3Q8N7X2 389 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 OR4S2Q8NH73 311 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 C5orf30Q96GV9 206 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 RNASE7Q9H1E1 156 aaKnown RBP10.3□□□□□ -0.76
USHBP1-207ENST00000597928 ZNF835Q9Y2P0 537 aa10.3□□□□□ -0.76
USHBP1-207ENST00000597928 HPRT1P00492 218 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 DDTP30046 118 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 HES1Q14469 280 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 TEPPQ6URK8 271 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 LYPD6BQ8NI32 183 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 ASCL2Q99929 193 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 PTPRQQ9UMZ3 2332 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 TRAV5A0A0B4J249 113 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 IQCF6A8MYZ5 107 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 B4DEV8 164 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 MGST3O14880 152 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 IGHV2-5P01817 119 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 FOLR2P14207 255 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 ZNF146Q15072 292 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 MORN2Q502X0 79 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 SLC35E4Q6ICL7 350 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 OR1L6Q8NGR2 347 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 IGKV1D-17A0A075B6S4 117 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 IFITM10A6NMD0 228 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 PRR33A8MZF0 331 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 RAB29O14966 203 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 MMP23AO75900 390 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 CD24P25063 80 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 DUTP33316 252 aaKnown RBP10.29□□□□□ -0.76
USHBP1-207ENST00000597928 CNN1P51911 297 aaKnown RBP10.29□□□□□ -0.76
USHBP1-207ENST00000597928 ATP6V1FQ16864 119 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 RTL8BQ17RB0 113 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 OR2T6Q8NHC8 308 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 TBX15Q96SF7 602 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 SPOCK3Q9BQ16 436 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 CTDSP1Q9GZU7 261 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 HSPB7Q9UBY9 170 aa10.29□□□□□ -0.76
USHBP1-207ENST00000597928 SAA2-SAA4A0A096LPE2 208 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 TRGV8A0A0C4DH27 118 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 TMEM210A6NLX4 147 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 SAA2P0DJI9 122 aaPredicted RBP10.28□□□□□ -0.76
USHBP1-207ENST00000597928 CRISP2P16562 243 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 UBE2L3P68036 154 aaKnown RBP10.28□□□□□ -0.76
USHBP1-207ENST00000597928 OR4A47Q6IF82 309 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 C19orf35Q6ZS72 473 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 CYP2G1PQ6ZSU1 146 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 GCSAMQ8N6F7 178 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 OR9G1Q8NH87 305 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 OCC1Q8TAD7 63 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 LINC00479Q96M42 142 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 PSMG3Q9BT73 122 aaPredicted RBP10.28□□□□□ -0.76
USHBP1-207ENST00000597928 SRD5A3Q9H8P0 318 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 FKBP11Q9NYL4 201 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 K7EM74 188 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 COX7A2P2O60397 106 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 AMBPP02760 352 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 IGKV1-16P04430 117 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 IL6RP08887 468 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms