RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RAB9AP51151 201 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 TRIM16LQ309B1 348 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 ASPHD1Q5U4P2 390 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 CASTOR1Q8WTX7 329 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 COMMD5Q9GZQ3 224 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 NAA60Q9H7X0 242 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 COA4Q9NYJ1 87 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 VSIG4Q9Y279 399 aa15.34■□□□□ 0.05
SHKBP1-214ENST00000597396 NAP1L6A6NFF2 107 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 IL6RP08887 468 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 MYOD1P15172 320 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 SLC6A1P30531 599 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 CDX1P47902 265 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 TPPP2P59282 170 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 SP6Q3SY56 376 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 C8orf86Q6ZUL3 223 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 H2BFWTQ7Z2G1 175 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 SGPP2Q8IWX5 399 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 MS4A10Q96PG2 267 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 SLA2Q9H6Q3 261 aa15.33■□□□□ 0.04
SHKBP1-214ENST00000597396 TRRAPQ9Y4A5 3859 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 HMX3A6NHT5 357 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 CRYM-AS1A6NIL9 109 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 CENPXA8MT69 81 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 H3BUA1 57 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 ATG12O94817 140 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 IGKV1-39P01597 117 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 TRGV3P03979 118 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 IGKV1D-39P04432 117 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 OR5AC1P0C628 307 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 OR9G9P0C7N8 305 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 UCP1P25874 307 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 AKR1C2P52895 323 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 CADM3Q8N126 398 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 ZNF491Q8N8L2 437 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 ADAD2Q8NCV1 583 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 MYOZ3Q8TDC0 251 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 SEC22AQ96IW7 307 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 UBE2E2Q96LR5 201 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 TSC22D3Q99576 134 aa15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 SLC25A21Q9BQT8 299 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-214ENST00000597396 AKR1C4P17516 323 aa15.31■□□□□ 0.04
SHKBP1-214ENST00000597396 DHODHQ02127 395 aa15.31■□□□□ 0.04
SHKBP1-214ENST00000597396 SLC25A42Q86VD7 318 aa15.31■□□□□ 0.04
SHKBP1-214ENST00000597396 RNASE11Q8TAA1 199 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-214ENST00000597396 C4orf3Q8WVX3 66 aa15.31■□□□□ 0.04
SHKBP1-214ENST00000597396 C7orf50Q9BRJ6 194 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-214ENST00000597396 CCDC32Q9BV29 185 aa15.31■□□□□ 0.04
SHKBP1-214ENST00000597396 KCNIP3Q9Y2W7 256 aa15.31■□□□□ 0.04
SHKBP1-214ENST00000597396 NSG2Q9Y328 171 aa15.31■□□□□ 0.04
SHKBP1-214ENST00000597396 PKD1L1Q8TDX9 2849 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 TEX22C9J3V5 150 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 E7EUB6 86 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 FGF2P09038 288 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 OR2B8PP59922 312 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 TMED4Q7Z7H5 227 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 OR4A16Q8NH70 328 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 TMEM230Q96A57 120 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 TMEM222Q9H0R3 208 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 GNB4Q9HAV0 340 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 PRNDQ9UKY0 176 aa15.3■□□□□ 0.04
SHKBP1-214ENST00000597396 CCR6P51684 374 aa15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 KIAA0141Q14154 515 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 RBMS2Q15434 407 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 TTC9CQ8N5M4 171 aa15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 OR1L8Q8NGR8 309 aa15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 GLYATL2Q8WU03 294 aa15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 OR5B12Q96R08 314 aa15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 HINT2Q9BX68 163 aa15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 QTRT1Q9BXR0 403 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 WDR12Q9GZL7 423 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 FKBP11Q9NYL4 201 aa15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 OR51B2Q9Y5P1 312 aa15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 VWFP04275 2813 aa15.29■□□□□ 0.04
SHKBP1-214ENST00000597396 A0A1B0GW64 132 aa15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 C15orf61A6NNL5 157 aa15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 RBMXL2O75526 392 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 TRAPPC2P0DI81 140 aa15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 TRAPPC2BP0DI82 140 aa15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 MYCNOSP40205 109 aa15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 ZNF846Q147U1 533 aa15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 DEFB136Q30KP8 78 aa15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 THOC7Q6I9Y2 204 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 RRNAD1Q96FB5 475 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 DUX3Q96PT4 197 aa15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 ZNF257Q9Y2Q1 563 aa15.28■□□□□ 0.04
SHKBP1-214ENST00000597396 TEX50A0A1B0GTY4 177 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 C13orf42A0A1B0GVH6 325 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 CGB1A6NKQ9 187 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 NPIPB5A8MRT5 1133 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 CCL24O00175 119 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 CDS2O95674 445 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 IGKV1-5P01602 117 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 IGHV3-11P01762 117 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 ANXA3P12429 323 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 AREGP15514 252 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 CD33P20138 364 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 ETV3LQ6ZN32 361 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 RBPMSQ93062 196 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 GALNT14Q96FL9 552 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms