RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 OR2A7Q96R45 310 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 C13orf42A0A1B0GVH6 325 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 HMX3A6NHT5 357 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 FAM25EA8MYX2 175 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 RRHO14718 337 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 SIX6O95475 246 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 OR9G9P0C7N8 305 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 BCAP31P51572 246 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 H2BFSP57053 126 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 C3orf56Q8N813 242 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 OR2T6Q8NHC8 308 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 VSTM2AQ8TAG5 236 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 OR10C1Q96KK4 312 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 TPSG1Q9NRR2 321 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 BET1LQ9NYM9 111 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 METTL1Q9UBP6 276 aaKnown RBP11.86□□□□□ -0.51
TRIM28-207ENST00000597136 TRRAPQ9Y4A5 3859 aa11.86□□□□□ -0.51
TRIM28-207ENST00000597136 TRAV3A0A0B4J244 114 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 A0A1B0GU03 582 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 C5orf51A6NDU8 294 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 UPK2O00526 184 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 KBTBD11O94819 623 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 SLC25A6P12236 298 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 GSG1LQ6UXU4 331 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 FAM71E2Q8N5Q1 922 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 OR4A5Q8NH83 315 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 FBXL15Q9H469 300 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 KIAA1456Q9P272 454 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 CACNG5Q9UF02 275 aa11.85□□□□□ -0.51
TRIM28-207ENST00000597136 FGF16O43320 207 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 PJVKQ0ZLH3 352 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 SMCO1Q147U7 214 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 C5orf64Q2M2E5 130 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 MRGPRG-AS1Q2M3A8 158 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 IAH1Q2TAA2 248 aaPredicted RBP11.84□□□□□ -0.51
TRIM28-207ENST00000597136 TMEM167AQ8TBQ9 72 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 SPIN2AQ99865 258 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 SPIN2BQ9BPZ2 258 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 NSG2Q9Y328 171 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 A0A1B0GUS0 222 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 M0QZK8 103 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 FCN1O00602 326 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 SNAPC5O75971 98 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 PLGLAQ15195 96 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 PRSS8Q16651 343 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 ARSJQ5FYB0 599 aaPredicted RBP11.84□□□□□ -0.51
TRIM28-207ENST00000597136 THOC7Q6I9Y2 204 aaKnown RBP11.84□□□□□ -0.51
TRIM28-207ENST00000597136 PPP1R27Q86WC6 154 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 OR4A16Q8NH70 328 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 CHAC2Q8WUX2 184 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 WFDC12Q8WWY7 111 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 C2orf50Q96LR7 162 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 ZNF747Q9BV97 191 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 ZNF430Q9H8G1 570 aaPredicted RBP11.84□□□□□ -0.51
TRIM28-207ENST00000597136 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.84□□□□□ -0.51
TRIM28-207ENST00000597136 COA4Q9NYJ1 87 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 LINC00527Q9UJ94 153 aa11.84□□□□□ -0.51
TRIM28-207ENST00000597136 PITX3O75364 302 aa11.83□□□□□ -0.52
TRIM28-207ENST00000597136 TRAPPC2P0DI81 140 aa11.83□□□□□ -0.52
TRIM28-207ENST00000597136 TRAPPC2BP0DI82 140 aa11.83□□□□□ -0.52
TRIM28-207ENST00000597136 OR2B8PP59922 312 aa11.83□□□□□ -0.52
TRIM28-207ENST00000597136 RPL8P62917 257 aaKnown RBP11.83□□□□□ -0.52
TRIM28-207ENST00000597136 ZBTB8BQ8NAP8 495 aaPredicted RBP11.83□□□□□ -0.52
TRIM28-207ENST00000597136 NOL4LQ96MY1 436 aaPredicted RBP11.83□□□□□ -0.52
TRIM28-207ENST00000597136 CLCC1Q96S66 551 aa11.83□□□□□ -0.52
TRIM28-207ENST00000597136 RASL11BQ9BPW5 248 aa11.83□□□□□ -0.52
TRIM28-207ENST00000597136 HSPB9Q9BQS6 159 aa11.83□□□□□ -0.52
TRIM28-207ENST00000597136 TMEM14BQ9NUH8 114 aa11.83□□□□□ -0.52
TRIM28-207ENST00000597136 GSKIPQ9P0R6 139 aa11.83□□□□□ -0.52
TRIM28-207ENST00000597136 C15orf61A6NNL5 157 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 RBMXL2O75526 392 aaKnown RBP11.82□□□□□ -0.52
TRIM28-207ENST00000597136 FGF2P09038 288 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 VDAC2P45880 294 aaPredicted RBP11.82□□□□□ -0.52
TRIM28-207ENST00000597136 AARDQ4LEZ3 155 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 C10orf99Q6UWK7 81 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 FOXRED2Q8IWF2 684 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 MMD2Q8IY49 270 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 KLHDC1Q8N7A1 406 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 C11orf44Q8N8P7 122 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 OR1S1Q8NH92 325 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 WDR89Q96FK6 387 aaPredicted RBP11.82□□□□□ -0.52
TRIM28-207ENST00000597136 PDCD10Q9BUL8 212 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 QTRT1Q9BXR0 403 aaKnown RBP11.82□□□□□ -0.52
TRIM28-207ENST00000597136 ZNF436Q9C0F3 470 aaPredicted RBP11.82□□□□□ -0.52
TRIM28-207ENST00000597136 WNT10AQ9GZT5 417 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 PRNDQ9UKY0 176 aa11.82□□□□□ -0.52
TRIM28-207ENST00000597136 FOXA2Q9Y261 457 aaPredicted RBP11.82□□□□□ -0.52
TRIM28-207ENST00000597136 IGHG2P01859 326 aa11.81□□□□□ -0.52
TRIM28-207ENST00000597136 IL15RAQ13261 267 aa11.81□□□□□ -0.52
TRIM28-207ENST00000597136 ZNF429Q86V71 674 aa11.81□□□□□ -0.52
TRIM28-207ENST00000597136 OR4D5Q8NGN0 318 aa11.81□□□□□ -0.52
TRIM28-207ENST00000597136 NMES1Q9C002 83 aa11.81□□□□□ -0.52
TRIM28-207ENST00000597136 FKBP11Q9NYL4 201 aa11.81□□□□□ -0.52
TRIM28-207ENST00000597136 ST8SIA3O43173 380 aa11.8□□□□□ -0.52
TRIM28-207ENST00000597136 HLA-DRB1P01911 266 aa11.8□□□□□ -0.52
TRIM28-207ENST00000597136 GIPP09681 153 aaPredicted RBP11.8□□□□□ -0.52
TRIM28-207ENST00000597136 MYOD1P15172 320 aa11.8□□□□□ -0.52
TRIM28-207ENST00000597136 MAS1LP35410 378 aa11.8□□□□□ -0.52
TRIM28-207ENST00000597136 SSBP2P81877 361 aaPredicted RBP11.8□□□□□ -0.52
TRIM28-207ENST00000597136 CYCSP99999 105 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms