RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 FANCD2OSQ96PS1 177 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 PRR25Q96S07 402 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 SRSF8Q9BRL6 282 aaKnown RBP9.99□□□□□ -0.81
USE1-207ENST00000596136 EXTL2Q9UBQ6 330 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 KLK11Q9UBX7 282 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 DMRT1Q9Y5R6 373 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.98□□□□□ -0.81
USE1-207ENST00000596136 TRAV3A0A0B4J244 114 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 RLN1P04808 185 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 MYOD1P15172 320 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 AREGP15514 252 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 TBPP20226 339 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 RPL5P46777 297 aaKnown RBP9.98□□□□□ -0.81
USE1-207ENST00000596136 LHFPL1Q86WI0 220 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 CLVS1Q8IUQ0 354 aaPredicted RBP9.98□□□□□ -0.81
USE1-207ENST00000596136 OR6Q1Q8NGQ2 317 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 OR52I2Q8NH67 350 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 DYNC2LI1Q8TCX1 351 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 FCAMRQ8WWV6 532 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 FYTTD1Q96QD9 318 aaKnown RBP9.98□□□□□ -0.81
USE1-207ENST00000596136 OR4C12Q96R67 309 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 ELOVL1Q9BW60 279 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 HRASLSQ9HDD0 168 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 TMEM140Q9NV12 185 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
USE1-207ENST00000596136 IGLC7A0M8Q6 106 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 MARCH11A6NNE9 402 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 CTDSP2O14595 271 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 IGLV1-51P01701 117 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 PTBP1P26599 531 aaKnown RBP eCLIP9.97□□□□□ -0.81
USE1-207ENST00000596136 LPAR6P43657 344 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 EXOSC2Q13868 293 aaKnown RBP9.97□□□□□ -0.81
USE1-207ENST00000596136 C15orf32Q32M92 178 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 THOC7Q6I9Y2 204 aaKnown RBP9.97□□□□□ -0.81
USE1-207ENST00000596136 SLC38A6Q8IZM9 456 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 ARRDC1Q8N5I2 433 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 DMBX1Q8NFW5 382 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 OR9G4Q8NGQ1 327 aa9.97□□□□□ -0.81
USE1-207ENST00000596136 CCDC59Q9P031 241 aaKnown RBP9.97□□□□□ -0.81
USE1-207ENST00000596136 IGLV11-55A0A075B6I3 123 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 DPPA5A6NC42 116 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 GABARAPH6UMI1 98 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 M0QYG6 137 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 BMPR1BO00238 502 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 OR2J3O76001 311 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 DHFRP00374 187 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 CD74P04233 296 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 CD3DP04234 171 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 SPNP16150 400 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 HIST1H1BP16401 226 aaKnown RBP9.96□□□□□ -0.82
USE1-207ENST00000596136 SYNJ2BPP57105 145 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 RND3P61587 244 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 MRPS10P82664 201 aaKnown RBP9.96□□□□□ -0.82
USE1-207ENST00000596136 SSBP1Q04837 148 aaKnown RBP9.96□□□□□ -0.82
USE1-207ENST00000596136 C19orf35Q6ZS72 473 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 LAX1Q8IWV1 398 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 TMEM229BQ8NBD8 167 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 COMMD5Q9GZQ3 224 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 FBXL7Q9UJT9 491 aa9.96□□□□□ -0.82
USE1-207ENST00000596136 TEX50A0A1B0GTY4 177 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 NDUFB8O95169 186 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 KRASP01116 189 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 CSN3P07498 182 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 GP9P14770 177 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 S100GP29377 79 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 MECP2P51608 486 aaKnown RBP9.95□□□□□ -0.82
USE1-207ENST00000596136 ERVK-16P61578 105 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 CD69Q07108 199 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 TATDN3Q17R31 274 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 RPEL1Q2QD12 228 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 PHLDA2Q53GA4 152 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 RNASE10Q5GAN6 216 aaKnown RBP9.95□□□□□ -0.82
USE1-207ENST00000596136 HSD17B13Q7Z5P4 300 aaPredicted RBP9.95□□□□□ -0.82
USE1-207ENST00000596136 TBC1D26Q86UD7 250 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 ZNF486Q96H40 463 aaPredicted RBP9.95□□□□□ -0.82
USE1-207ENST00000596136 QTRT1Q9BXR0 403 aaKnown RBP9.95□□□□□ -0.82
USE1-207ENST00000596136 NDUFA4L2Q9NRX3 87 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 RABL2AQ9UBK7 228 aaPredicted RBP9.95□□□□□ -0.82
USE1-207ENST00000596136 RABL2BQ9UNT1 228 aa9.95□□□□□ -0.82
USE1-207ENST00000596136 H3BMQ9 156 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 CTDSPLO15194 276 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 RGS5O15539 181 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 IGKV1-39P01597 117 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 IFNA6P05013 189 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 NHLRC4P0CG21 123 aaPredicted RBP9.94□□□□□ -0.82
USE1-207ENST00000596136 TRAPPC2P0DI81 140 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 TRAPPC2BP0DI82 140 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 G6PCP35575 357 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 TAS2R19P59542 299 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 OR1L8Q8NGR8 309 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 TERB2Q8NHR7 220 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 SMIM4Q8WVI0 70 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 SEC22AQ96IW7 307 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 CCDC140Q96MF4 163 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 SLIRPQ9GZT3 109 aaKnown RBP9.94□□□□□ -0.82
USE1-207ENST00000596136 NXF2Q9GZY0 626 aaKnown RBP9.94□□□□□ -0.82
USE1-207ENST00000596136 SMAD5-AS1Q9Y6J3 95 aa9.94□□□□□ -0.82
USE1-207ENST00000596136 LGALS9O00182 355 aa9.93□□□□□ -0.82
USE1-207ENST00000596136 GGCTO75223 188 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 204.6 ms